Details for gene set REACTOME_COLLAGEN

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	REACTOME_COLLAGEN_FORMATION
Enrichment Score (ES)	0.7388112
Normalized Enrichment Score (NES)	1.5347357
Nominal p-value	0.0
FDR q-value	0.106184795
FWER p-Value	0.165

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Loxl2	na	41	2.237	0.0346	Yes
2	Col6a3	na	43	2.215	0.0695	Yes
3	Col5a2	na	51	2.188	0.1038	Yes
4	Lox	na	54	2.173	0.1381	Yes
5	Col3a1	na	89	2.027	0.1695	Yes
6	Col1a2	na	94	2.011	0.2011	Yes
7	Col1a1	na	138	1.868	0.2298	Yes
8	Col28a1	na	152	1.835	0.2585	Yes
9	Loxl1	na	188	1.795	0.2862	Yes
10	Adamts2	na	192	1.788	0.3143	Yes
11	Col4a1	na	215	1.736	0.3413	Yes
12	Col6a2	na	305	1.618	0.3653	Yes
13	Col16a1	na	353	1.579	0.3893	Yes
14	Mmp13	na	366	1.563	0.4138	Yes
15	Col4a6	na	450	1.481	0.4357	Yes
16	Col4a5	na	476	1.461	0.4583	Yes
17	Ctss	na	479	1.459	0.4812	Yes
18	Col6a1	na	551	1.412	0.5022	Yes
19	Serpinh1	na	632	1.365	0.5224	Yes
20	Col15a1	na	647	1.355	0.5435	Yes
21	Plod2	na	659	1.349	0.5645	Yes
22	Col4a2	na	673	1.340	0.5855	Yes
23	Pcolce	na	772	1.286	0.6040	Yes
24	Col5a1	na	807	1.264	0.6233	Yes
25	Crtap	na	1007	1.166	0.6382	Yes
26	Loxl3	na	1029	1.156	0.6560	Yes
27	Col14a1	na	1055	1.150	0.6737	Yes
28	P3h2	na	1354	1.045	0.6849	Yes
29	Col11a1	na	1918	0.901	0.6891	Yes
30	P3h3	na	1942	0.897	0.7029	Yes
31	Colgalt1	na	2589	0.771	0.7035	Yes
32	Ctsb	na	2805	0.738	0.7114	Yes
33	Mmp9	na	3603	0.646	0.7074	Yes
34	Pcolce2	na	3911	0.619	0.7117	Yes
35	Ctsl	na	4192	0.593	0.7161	Yes
36	Col8a1	na	4239	0.589	0.7246	Yes
37	Col6a6	na	4528	0.567	0.7284	Yes
38	Col12a1	na	4732	0.552	0.7335	Yes
39	Col6a5	na	4912	0.539	0.7388	Yes
40	Pxdn	na	7269	0.399	0.7033	No
41	Col9a1	na	7330	0.396	0.7084	No
42	P3h1	na	7581	0.385	0.7101	No
43	Plod3	na	8194	0.354	0.7048	No
44	Col23a1	na	8728	0.329	0.7005	No
45	Ppib	na	10620	0.247	0.6708	No
46	Col22a1	na	11743	0.204	0.6541	No
47	Col4a4	na	13142	0.149	0.6316	No
48	Tll1	na	13173	0.148	0.6334	No
49	Plod1	na	13667	0.130	0.6267	No
50	P4hb	na	13803	0.126	0.6263	No
51	Col18a1	na	15330	0.069	0.6003	No
52	Col25a1	na	15687	0.057	0.5949	No
53	P4ha1	na	17189	0.018	0.5685	No
54	Col8a2	na	17629	0.013	0.5609	No
55	Mmp20	na	18818	0.003	0.5399	No
56	Tll2	na	26080	0.000	0.4109	No
57	Col26a1	na	28290	0.000	0.3716	No
58	Col19a1	na	29274	0.000	0.3542	No
59	Col2a1	na	45817	-0.003	0.0604	No
60	Col10a1	na	45969	-0.004	0.0578	No
61	Loxl4	na	46900	-0.016	0.0415	No
62	Col5a3	na	49509	-0.103	-0.0032	No
63	Colgalt2	na	51303	-0.191	-0.0320	No
64	P4ha3	na	51788	-0.216	-0.0372	No
65	Adamts3	na	52386	-0.250	-0.0439	No
66	Col24a1	na	52907	-0.285	-0.0486	No
67	Col9a2	na	53201	-0.305	-0.0490	No
68	Adamts14	na	53260	-0.311	-0.0451	No
69	Col9a3	na	53285	-0.312	-0.0406	No
70	Col13a1	na	54845	-0.465	-0.0610	No
71	P4ha2	na	55086	-0.501	-0.0574	No
72	Col27a1	na	55152	-0.511	-0.0504	No
73	Col11a2	na	55459	-0.579	-0.0468	No
74	Bmp1	na	55502	-0.586	-0.0383	No
75	Col7a1	na	56269	-1.037	-0.0355	No
76	Col17a1	na	56301	-1.098	-0.0188	No
77	Col20a1	na	56336	-1.273	0.0007	No