Details for gene set REACTOME_ECM_PROTEOGLYCANS[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	REACTOME_ECM_PROTEOGLYCANS
Enrichment Score (ES)	0.81951123
Normalized Enrichment Score (NES)	1.4860044
Nominal p-value	0.0
FDR q-value	0.0933583
FWER p-Value	0.385

Fig 1: Enrichment plot: REACTOME_ECM_PROTEOGLYCANS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itgax	na	27	2.329	0.0627	Yes
2	Col6a3	na	43	2.215	0.1226	Yes
3	Col5a2	na	51	2.188	0.1818	Yes
4	Col3a1	na	89	2.027	0.2362	Yes
5	Col1a2	na	94	2.011	0.2907	Yes
6	Col1a1	na	138	1.868	0.3406	Yes
7	Col6a2	na	305	1.618	0.3816	Yes
8	Col6a1	na	551	1.412	0.4155	Yes
9	Sparc	na	554	1.410	0.4537	Yes
10	Itgav	na	717	1.312	0.4865	Yes
11	Itga8	na	781	1.281	0.5201	Yes
12	Col5a1	na	807	1.264	0.5540	Yes
13	Bgn	na	838	1.247	0.5873	Yes
14	Dcn	na	945	1.195	0.6178	Yes
15	Itga9	na	1242	1.083	0.6420	Yes
16	Itga2	na	1286	1.071	0.6703	Yes
17	Tnc	na	1292	1.067	0.6991	Yes
18	Vcan	na	1381	1.039	0.7258	Yes
19	App	na	1644	0.964	0.7473	Yes
20	Itgb6	na	2019	0.876	0.7644	Yes
21	Tnxb	na	2885	0.727	0.7688	Yes
22	Itgb1	na	4038	0.607	0.7648	Yes
23	Serpine1	na	4394	0.578	0.7742	Yes
24	Col6a6	na	4528	0.567	0.7872	Yes
25	Vtn	na	4779	0.549	0.7977	Yes
26	Col6a5	na	4912	0.539	0.8099	Yes
27	Comp	na	5168	0.519	0.8195	Yes
28	Hapln1	na	6374	0.443	0.8101	No
29	Col9a1	na	7330	0.396	0.8039	No
30	Fn1	na	7934	0.367	0.8032	No
31	Agrn	na	9915	0.276	0.7755	No
32	Dmp1	na	18595	0.004	0.6216	No
33	Acan	na	18987	0.002	0.6147	No
34	Tnn	na	19138	0.001	0.6121	No
35	Dspp	na	21201	0.000	0.5755	No
36	Matn1	na	28504	0.000	0.4458	No
37	Bcan	na	33067	0.000	0.3648	No
38	Matn3	na	43014	0.000	0.1883	No
39	Col2a1	na	45817	-0.003	0.1386	No
40	Itgb3	na	48205	-0.050	0.0976	No
41	Col5a3	na	49509	-0.103	0.0773	No
42	Itga7	na	50435	-0.143	0.0647	No
43	Matn4	na	50896	-0.167	0.0611	No
44	Tnr	na	51689	-0.212	0.0528	No
45	Col9a2	na	53201	-0.305	0.0343	No
46	Col9a3	na	53285	-0.312	0.0413	No
47	Itga2b	na	55091	-0.502	0.0228	No

Fig 2: REACTOME_ECM_PROTEOGLYCANS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REACTOME_ECM_PROTEOGLYCANS: Random ES distribution   
Gene set null distribution of ES for REACTOME_ECM_PROTEOGLYCANS