DatasetRPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls
#ClusterKO_versus_Cyp2c44KO
PhenotypeRPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in classClusterKO
GeneSetWP_FOCAL_ADHESION
Enrichment Score (ES)0.7360021
Normalized Enrichment Score (NES)1.4165789
Nominal p-value0.001996008
FDR q-value0.06926594
FWER p-Value0.355
Table: GSEA Results Summary



Fig 1: Enrichment plot: WP_FOCAL_ADHESION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Itgaxna272.3290.0172Yes
2Col5a2na512.1880.0335Yes
3Col3a1na892.0270.0482Yes
4Col1a2na942.0110.0634Yes
5Pdgfrbna1201.9340.0777Yes
6Pdgfbna1301.8930.0919Yes
7Col1a1na1381.8680.1060Yes
8Cav2na1551.8310.1196Yes
9Col4a1na2151.7360.1318Yes
10Fgrna2191.7260.1449Yes
11Itgb4na2361.7110.1576Yes
12Srcna2861.6400.1692Yes
13Col6a2na3051.6180.1812Yes
14Spp1na3061.6170.1935Yes
15Lama2na3201.6020.2054Yes
16Lama5na3301.5970.2174Yes
17Itgb2na3971.5290.2278Yes
18Col4a6na4501.4810.2382Yes
19Pdgfrana4661.4660.2491Yes
20Pik3r5na4851.4560.2598Yes
21Flnana5161.4380.2702Yes
22Col4a2na6731.3400.2776Yes
23Vav1na6791.3340.2877Yes
24Itgavna7171.3120.2970Yes
25Itgamna7181.3110.3070Yes
26Cav1na7341.3040.3166Yes
27Actn1na7441.2980.3263Yes
28Itga8na7811.2810.3354Yes
29Col5a1na8071.2640.3446Yes
30Akt3na8171.2580.3540Yes
31Pik3cgna8551.2390.3628Yes
32Vaspna8931.2220.3714Yes
33Actbna9301.2010.3799Yes
34Thbs2na9321.2000.3890Yes
35Pdgfana9331.1980.3981Yes
36Pdgfdna9461.1940.4070Yes
37Lamc1na9471.1940.4161Yes
38Lamc2na9731.1830.4246Yes
39Mapk7na10101.1640.4328Yes
40Hckna11301.1230.4392Yes
41Itga4na11661.1050.4470Yes
42Pak6na11681.1050.4554Yes
43Pak1na11721.1020.4637Yes
44Vclna11851.0980.4719Yes
45Thbs4na12281.0880.4794Yes
46Itga9na12421.0830.4874Yes
47Itgb8na12591.0770.4953Yes
48Bcl2na12851.0710.5030Yes
49Itga2na12861.0710.5111Yes
50Tncna12921.0670.5191Yes
51Pak3na13681.0410.5257Yes
52Thbs1na13761.0400.5335Yes
53Itga6na14151.0280.5407Yes
54Pdgfcna14611.0130.5476Yes
55Rac2na15550.9910.5534Yes
56Rap1bna16620.9580.5588Yes
57Itgb5na17240.9440.5649Yes
58Lamb1na17990.9280.5707Yes
59Itgalna18380.9180.5770Yes
60Cdc42na18880.9060.5830Yes
61Erbb2na19090.9040.5895Yes
62Col11a1na19180.9010.5962Yes
63Pik3cdna20000.8830.6015Yes
64Itgb6na20190.8760.6078Yes
65Relnna21320.8550.6123Yes
66Birc3na21420.8520.6187Yes
67Mapk6na21830.8440.6244Yes
68Hgfna23610.8110.6274Yes
69Pak2na23680.8100.6334Yes
70Styk1na24860.7910.6374Yes
71Akt1na25660.7750.6419Yes
72Itga3na26310.7650.6465Yes
73Rap1ana27660.7440.6498Yes
74Rock2na28760.7280.6534Yes
75Tnxbna28850.7270.6588Yes
76Vegfcna30210.7110.6618Yes
77Dock1na30800.7040.6661Yes
78Itga5na33380.6730.6666Yes
79Rhobna35080.6540.6686Yes
80Actg1na39140.6190.6661Yes
81Metna39900.6120.6694Yes
82Itgb1na40380.6070.6732Yes
83Ptenna42120.5900.6746Yes
84Crklna43560.5800.6765Yes
85Pik3cbna47280.5520.6741Yes
86Vtnna47790.5490.6774Yes
87Grb2na47830.5480.6815Yes
88Parvbna48370.5440.6847Yes
89Map2k3na49150.5390.6874Yes
90Crkna49240.5380.6914Yes
91Itgb7na49320.5370.6953Yes
92Rhoana49590.5350.6989Yes
93Badna49610.5350.7030Yes
94Rock1na50990.5250.7045Yes
95Itga11na51090.5240.7084Yes
96Gsk3bna52330.5150.7101Yes
97Ptk2na52360.5150.7140Yes
98Pak4na52440.5140.7177Yes
99Pip5k1cna55790.4900.7155Yes
100Thbs3na56010.4880.7189Yes
101Mapk1na56500.4850.7217Yes
102Capn1na60190.4630.7187Yes
103Rac1na61170.4580.7204Yes
104Birc2na61580.4560.7232Yes
105Lama4na63080.4470.7239Yes
106Lamb2na63440.4450.7267Yes
107Itgadna66020.4310.7254Yes
108Map2k6na69480.4130.7224Yes
109Zyxna70230.4090.7242Yes
110Map2k1na71160.4050.7256Yes
111Pik3r1na72540.3990.7262Yes
112Raf1na72900.3980.7286Yes
113Lamc3na73570.3950.7305Yes
114Shc1na73780.3940.7331Yes
115Selenopna73840.3940.7360Yes
116Tnk1na75890.3840.7353No
117Fn1na79340.3670.7320No
118Ccnd2na82350.3530.7293No
119Ccnd1na82890.3510.7310No
120Mapk9na84430.3430.7309No
121Igf1na84540.3420.7333No
122Egfrna86600.3330.7322No
123Rapgef1na88670.3230.7310No
124Pdpk1na91610.3090.7282No
125Elk1na91850.3080.7301No
126Arhgap5na93800.3010.7289No
127Pik3r2na96030.2910.7272No
128Ilkna101340.2680.7198No
129Mapk8na104310.2550.7165No
130Diaph1na107460.2420.7127No
131Pgfna109150.2340.7115No
132Pik3cana116450.2070.7001No
133Brafna119100.1960.6969No
134Map2k2na120440.1920.6960No
135Itgaena121200.1900.6961No
136Pik3r4na121310.1890.6974No
137Lama1na123090.1830.6956No
138Cav3na123160.1830.6969No
139Pxnna125090.1750.6948No
140Col4a4na131420.1490.6847No
141Tln1na135760.1320.6780No
142Akt2na136140.1320.6783No
143Vegfbna145590.0960.6623No
144Ptk6na145880.0960.6625No
145Sos1na156620.0580.6438No
146Chadna160980.0440.6364No
147Fynna162010.0410.6349No
148Txkna168450.0250.6237No
149Pelona172810.0170.6161No
150Lama3na179720.0090.6039No
151Mylk2na180340.0090.6028No
152Bcar1na181390.0080.6010No
153Tnnna191380.0010.5833No
154Ibspna234880.0000.5059No
155Shc3na45400-0.0010.1160No
156Myl6na45497-0.0010.1143No
157Col2a1na45817-0.0030.1086No
158Map2k5na47914-0.0400.0716No
159Itgb3na48205-0.0500.0668No
160Arafna49401-0.0980.0463No
161Col5a3na49509-0.1030.0452No
162Rac3na50165-0.1320.0346No
163Blkna50294-0.1370.0333No
164Ppp1r12ana50327-0.1380.0338No
165Itga7na50435-0.1430.0330No
166Tesk2na50561-0.1490.0319No
167Tnrna51689-0.2120.0134No
168Ccnd3na51911-0.2230.0112No
169Mylkna52272-0.2420.0066No
170Pak5na52630-0.2650.0023No
171Mapk12na53628-0.339-0.0129No
172Srmsna54005-0.372-0.0167No
173Farp2na54567-0.428-0.0235No
174Flt1na54568-0.428-0.0202No
175Lamb3na54941-0.477-0.0232No
176Itga2bna55091-0.502-0.0220No
177Itga10na55312-0.544-0.0218No
178Vegfdna55444-0.576-0.0198No
179Col11a2na55459-0.579-0.0156No
180Tnk2na55486-0.583-0.0116No
181Junna55488-0.584-0.0072No
182Vwfna55671-0.633-0.0056No
183Egfna55719-0.651-0.0015No
184Mapk4na56045-0.819-0.0011No
185Vegfana56181-0.9170.0035No
Table: GSEA details [plain text format]



Fig 2: WP_FOCAL_ADHESION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WP_FOCAL_ADHESION: Random ES distribution   
Gene set null distribution of ES for WP_FOCAL_ADHESION