Details for gene set BIOCARTA_INFLAM_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_WT.RPKM_matrix___ClusterKO_vs_WT.cls #ClusterKO_versus_WT
Phenotype	RPKM_matrix___ClusterKO_vs_WT.cls#ClusterKO_versus_WT
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_INFLAM_PATHWAY
Enrichment Score (ES)	0.806894
Normalized Enrichment Score (NES)	1.4673259
Nominal p-value	0.009746589
FDR q-value	0.06138858
FWER p-Value	0.04

Fig 1: Enrichment plot: BIOCARTA_INFLAM_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tgfb1	na	354	1.708	0.1303	Yes
2	Pdgfa	na	587	1.517	0.2476	Yes
3	Il1a	na	736	1.430	0.3593	Yes
4	Csf1	na	1053	1.285	0.4564	Yes
5	Tgfb2	na	1633	1.089	0.5333	Yes
6	Tnf	na	1824	1.040	0.6131	Yes
7	Tgfb3	na	1929	1.021	0.6929	Yes
8	Il6	na	2624	0.896	0.7522	Yes
9	Il7	na	4907	0.650	0.7637	Yes
10	Il15	na	6279	0.548	0.7832	Yes
11	Il11	na	7159	0.491	0.8069	Yes
12	Csf2	na	12733	0.200	0.7240	No
13	Ifng	na	15006	0.105	0.6921	No
14	Il10	na	15507	0.089	0.6903	No
15	Ifnb1	na	18247	0.023	0.6436	No
16	Il4	na	18792	0.017	0.6353	No
17	Il5	na	19813	0.009	0.6179	No
18	Csf3	na	19989	0.008	0.6154	No
19	Il13	na	20162	0.007	0.6129	No
20	Il3	na	42520	0.000	0.2162	No
21	Ifna1	na	47411	0.000	0.1294	No
22	Il2	na	52444	-0.150	0.0522	No
23	Cd4	na	53531	-0.220	0.0505	No

Fig 2: BIOCARTA_INFLAM_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_INFLAM_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_INFLAM_PATHWAY