Details for gene set BIOCARTA_RAC1_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_WT.RPKM_matrix___ClusterKO_vs_WT.cls #ClusterKO_versus_WT
Phenotype	RPKM_matrix___ClusterKO_vs_WT.cls#ClusterKO_versus_WT
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_RAC1_PATHWAY
Enrichment Score (ES)	0.77612555
Normalized Enrichment Score (NES)	1.3796568
Nominal p-value	0.0077220076
FDR q-value	0.03944828
FWER p-Value	0.241

Fig 1: Enrichment plot: BIOCARTA_RAC1_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ncf2	na	29	2.468	0.1469	Yes
2	Vav1	na	153	1.976	0.2628	Yes
3	Map3k1	na	538	1.562	0.3493	Yes
4	Pik3cg	na	599	1.509	0.4384	Yes
5	Pdgfra	na	661	1.468	0.5251	Yes
6	Trio	na	1346	1.178	0.5833	Yes
7	Pak1	na	1521	1.124	0.6474	Yes
8	Pld1	na	1628	1.090	0.7107	Yes
9	Limk1	na	2461	0.923	0.7510	Yes
10	Wasf1	na	5082	0.639	0.7427	Yes
11	Ralbp1	na	5290	0.621	0.7761	Yes
12	Pik3ca	na	7719	0.459	0.7604	No
13	Ppp1r12b	na	9464	0.362	0.7511	No
14	Pik3r1	na	9928	0.337	0.7631	No
15	Mylk	na	11354	0.264	0.7536	No
16	Rps6kb1	na	11582	0.254	0.7647	No
17	Cdk5	na	12101	0.229	0.7692	No
18	Arfip2	na	13718	0.158	0.7500	No
19	Cdk5r1	na	17124	0.040	0.6920	No
20	Chn1	na	50177	-0.036	0.1077	No
21	Mylpf	na	50223	-0.038	0.1092	No

Fig 2: BIOCARTA_RAC1_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_RAC1_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_RAC1_PATHWAY