Details for gene set BIOCARTA_TOLL_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_WT.RPKM_matrix___ClusterKO_vs_WT.cls #ClusterKO_versus_WT
Phenotype	RPKM_matrix___ClusterKO_vs_WT.cls#ClusterKO_versus_WT
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_TOLL_PATHWAY
Enrichment Score (ES)	0.77205116
Normalized Enrichment Score (NES)	1.3902597
Nominal p-value	0.0019455253
FDR q-value	0.052077256
FWER p-Value	0.196

Fig 1: Enrichment plot: BIOCARTA_TOLL_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Map3k1	na	538	1.562	0.1051	Yes
2	Nfkb1	na	1149	1.247	0.1857	Yes
3	Map3k14	na	1321	1.185	0.2697	Yes
4	Elk1	na	3181	0.820	0.2969	Yes
5	Pglyrp1	na	3439	0.791	0.3503	Yes
6	Nfkbia	na	4475	0.686	0.3823	Yes
7	Rela	na	4789	0.660	0.4252	Yes
8	Eif2ak2	na	4894	0.651	0.4711	Yes
9	Ikbkb	na	5426	0.610	0.5064	Yes
10	Map2k4	na	6383	0.542	0.5292	Yes
11	Fos	na	6426	0.539	0.5680	Yes
12	Mapk8	na	6857	0.511	0.5979	Yes
13	Jun	na	7021	0.500	0.6317	Yes
14	Map2k6	na	7489	0.471	0.6580	Yes
15	Traf6	na	8336	0.424	0.6741	Yes
16	Map3k7	na	8575	0.411	0.7000	Yes
17	Chuk	na	9053	0.383	0.7197	Yes
18	Ikbkg	na	9331	0.369	0.7419	Yes
19	Map2k3	na	9973	0.335	0.7551	Yes
20	Mapk14	na	10328	0.317	0.7721	Yes
21	Myd88	na	14287	0.136	0.7118	No
22	Irak1	na	14908	0.109	0.7088	No
23	Ppara	na	15574	0.087	0.7034	No
24	Ecsit	na	54283	-0.281	0.0372	No

Fig 2: BIOCARTA_TOLL_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_TOLL_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_TOLL_PATHWAY