DatasetRPKM_matrix___ClusterKO_vs_WT.RPKM_matrix___ClusterKO_vs_WT.cls
#ClusterKO_versus_WT
PhenotypeRPKM_matrix___ClusterKO_vs_WT.cls#ClusterKO_versus_WT
Upregulated in classClusterKO
GeneSetWP_APOPTOSIS
Enrichment Score (ES)0.7695512
Normalized Enrichment Score (NES)1.4370903
Nominal p-value0.0
FDR q-value0.11055712
FWER p-Value0.316
Table: GSEA Results Summary



Fig 1: Enrichment plot: WP_APOPTOSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pmaip1na642.2420.0418Yes
2Nfkbiena1352.0110.0791Yes
3Tnfrsf21na1971.8940.1142Yes
4Apaf1na4031.6640.1425Yes
5Map3k1na5381.5620.1700Yes
6Irf5na5881.5170.1982Yes
7Casp1na6801.4550.2244Yes
8Tnfsf10na8561.3720.2476Yes
9Bokna9411.3320.2716Yes
10Bcl2na9931.3120.2958Yes
11Tnfrsf10bna10761.2750.3188Yes
12Nfkb1na11491.2470.3414Yes
13Casp2na12961.1910.3616Yes
14Tnfrsf1bna17441.0580.3739Yes
15Mcl1na17761.0500.3934Yes
16Tnfna18241.0400.4125Yes
17Casp4na24770.9200.4185Yes
18Traf2na27440.8790.4306Yes
19Traf3na27700.8750.4469Yes
20Irf7na27800.8720.4635Yes
21Birc3na27980.8690.4798Yes
22Birc2na28090.8680.4963Yes
23Mdm2na28990.8550.5110Yes
24Bnip3lna29190.8520.5270Yes
25Xiapna30790.8330.5401Yes
26Irf4na31450.8250.5548Yes
27Gzmcna31990.8170.5695Yes
28Traf1na36740.7600.5756Yes
29Irf1na43590.6960.5768Yes
30Nfkbiana44750.6860.5879Yes
31Akt1na47000.6670.5967Yes
32Bidna47750.6610.6080Yes
33Relana47890.6600.6204Yes
34Tnfrsf1ana52680.6230.6239Yes
35Ikbkbna54260.6100.6328Yes
36Casp7na54520.6070.6440Yes
37Bcl2l11na54740.6060.6552Yes
38Bcl2l1na56330.5920.6637Yes
39Casp3na57260.5860.6733Yes
40Hellsna58120.5800.6829Yes
41Casp6na61530.5560.6875Yes
42Igf1rna61590.5560.6981Yes
43Baxna63460.5440.7052Yes
44Map2k4na63830.5420.7149Yes
45Bcl2l2na65540.5300.7220Yes
46Dffbna68170.5140.7272Yes
47Junna70210.5000.7332Yes
48Birc5na78310.4520.7275Yes
49Tnfrsf25na83860.4210.7257Yes
50Traddna85430.4130.7309Yes
51Trp53na89040.3920.7320Yes
52Ltana89870.3870.7379Yes
53Chukna90530.3830.7441Yes
54Scaf11na92480.3730.7478Yes
55Ikbkgna93310.3690.7534Yes
56Casp9na94160.3640.7589Yes
57Diablona96220.3540.7620Yes
58Ripk1na99170.3380.7633Yes
59Pik3r1na99280.3370.7696Yes
60Irf6na113820.2630.7488No
61Dffana116760.2490.7483No
62Nfkbibna118680.2390.7495No
63Badna122120.2230.7477No
64Irf2na124800.2110.7470No
65Igf1na128020.1970.7451No
66Cflarna129870.1890.7454No
67Trp63na139520.1490.7312No
68Casp8na148480.1120.7174No
69Faslna154900.0900.7077No
70Hrkna176480.0320.6700No
71Trp73na225010.0000.5839No
72Mapk10na49129-0.0010.1109No
73Prf1na49976-0.0290.0964No
74Fasna50720-0.0590.0844No
75Craddna51652-0.1040.0698No
76Mycna53324-0.2030.0440No
77Irf3na53404-0.2090.0466No
78Igf2na54704-0.3210.0297No
Table: GSEA details [plain text format]



Fig 2: WP_APOPTOSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WP_APOPTOSIS: Random ES distribution   
Gene set null distribution of ES for WP_APOPTOSIS