DatasetRPKM_matrix___ClusterKO_vs_WT.RPKM_matrix___ClusterKO_vs_WT.cls
#ClusterKO_versus_WT
PhenotypeRPKM_matrix___ClusterKO_vs_WT.cls#ClusterKO_versus_WT
Upregulated in classClusterKO
GeneSetWP_FOCAL_ADHESION
Enrichment Score (ES)0.766532
Normalized Enrichment Score (NES)1.4171457
Nominal p-value0.0
FDR q-value0.08316219
FWER p-Value0.392
Table: GSEA Results Summary



Fig 1: Enrichment plot: WP_FOCAL_ADHESION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Itgaxna322.4580.0162Yes
2Col5a2na392.3720.0323Yes
3Cav2na992.1140.0456Yes
4Fgrna1052.0970.0599Yes
5Lama5na1092.0840.0740Yes
6Itgb2na1501.9820.0868Yes
7Vav1na1531.9760.1003Yes
8Col1a2na1571.9710.1137Yes
9Col3a1na1651.9510.1269Yes
10Pdgfrbna1891.9060.1395Yes
11Pik3cdna2041.8880.1521Yes
12Pik3r5na2461.8330.1639Yes
13Srcna3021.7620.1749Yes
14Itga4na3191.7390.1865Yes
15Col4a1na3481.7110.1977Yes
16Col1a1na3551.7070.2092Yes
17Pdgfbna3791.6880.2203Yes
18Itga8na3831.6820.2317Yes
19Flnana3841.6820.2432Yes
20Hgfna4471.6290.2532Yes
21Spp1na4591.6240.2641Yes
22Vaspna4621.6220.2751Yes
23Hckna4681.6170.2861Yes
24Col5a1na5661.5330.2948Yes
25Pdgfana5871.5170.3048Yes
26Pik3cgna5991.5090.3149Yes
27Lama2na6141.5010.3249Yes
28Itgavna6351.4890.3347Yes
29Pdgfrana6611.4680.3443Yes
30Itga9na6641.4630.3542Yes
31Itgalna6791.4560.3639Yes
32Actn1na7101.4430.3732Yes
33Lamc1na7421.4280.3824Yes
34Mapk7na7431.4280.3922Yes
35Col4a2na7881.4090.4010Yes
36Akt3na8331.3830.4096Yes
37Rac2na8401.3780.4189Yes
38Thbs2na9651.3230.4258Yes
39Bcl2na9931.3120.4342Yes
40Pdgfdna10421.2890.4422Yes
41Col4a6na10431.2880.4510Yes
42Relnna10551.2840.4595Yes
43Erbb2na10981.2660.4674Yes
44Lamb1na11011.2650.4760Yes
45Parvbna11481.2470.4837Yes
46Col6a2na11521.2450.4921Yes
47Itgamna11941.2320.4998Yes
48Itga2na12681.2020.5067Yes
49Pdgfcna13751.1700.5128Yes
50Rock2na13801.1690.5207Yes
51Rap1bna14801.1380.5267Yes
52Pak1na15211.1240.5337Yes
53Itgb8na15711.1080.5404Yes
54Vegfcna15971.0990.5474Yes
55Rhobna16361.0880.5542Yes
56Pak6na17001.0690.5603Yes
57Txkna17171.0650.5673Yes
58Itgb7na17421.0580.5741Yes
59Thbs1na18251.0400.5797Yes
60Vclna18451.0360.5865Yes
61Itga6na18961.0270.5926Yes
62Itgb6na19061.0260.5994Yes
63Actg1na19121.0240.6063Yes
64Pak2na19801.0100.6120Yes
65Tncna20171.0050.6182Yes
66Cav1na20331.0020.6248Yes
67Itgadna23070.9500.6264Yes
68Ptenna23920.9350.6313Yes
69Lamc2na25320.9100.6351Yes
70Cdc42na25630.9060.6407Yes
71Lama4na26360.8950.6455Yes
72Birc3na27980.8690.6486Yes
73Birc2na28090.8680.6543Yes
74Lamb2na28110.8670.6602Yes
75Rock1na29890.8430.6628Yes
76Itgb5na30080.8410.6682Yes
77Dock1na31380.8250.6716Yes
78Elk1na31810.8200.6764Yes
79Crkna33280.8040.6793Yes
80Pdpk1na35430.7780.6808Yes
81Mapk6na35940.7710.6852Yes
82Itga3na38770.7400.6852Yes
83Itgb4na40080.7260.6879Yes
84Pik3cbna40790.7200.6915Yes
85Actbna40960.7190.6961Yes
86Styk1na42270.7090.6987Yes
87Pip5k1cna44680.6860.6991Yes
88Rap1ana45560.6780.7022Yes
89Gsk3bna45760.6770.7064Yes
90Akt1na47000.6670.7088Yes
91Fynna47340.6650.7127Yes
92Crklna47610.6620.7168Yes
93Mapk1na48640.6540.7194Yes
94Itgb3na50220.6420.7210Yes
95Arhgap5na51290.6350.7235Yes
96Ccnd2na53510.6160.7238Yes
97Itgb1na56290.5930.7229Yes
98Zyxna56660.5890.7262Yes
99Brafna56880.5880.7299Yes
100Map2k1na58790.5760.7304Yes
101Cav3na59220.5730.7336Yes
102Blkna61000.5600.7343Yes
103Itgaena62500.5490.7354Yes
104Itga5na63680.5430.7370Yes
105Rhoana64340.5380.7395Yes
106Capn1na64490.5370.7429Yes
107Metna64870.5350.7459Yes
108Ppp1r12ana66030.5270.7474Yes
109Grb2na67530.5180.7483Yes
110Pak3na67700.5170.7516Yes
111Mapk8na68570.5110.7535Yes
112Junna70210.5000.7540Yes
113Pak4na70800.4970.7564Yes
114Mapk9na72750.4840.7563Yes
115Rac1na72790.4840.7595Yes
116Map2k6na74890.4710.7590Yes
117Pik3cana77190.4590.7580Yes
118Tnxbna78070.4530.7596Yes
119Pxnna78360.4520.7622Yes
120Lamc3na78840.4500.7644Yes
121Raf1na79370.4470.7665Yes
122Tln1na84430.4170.7604No
123Pik3r2na85080.4140.7621No
124Pik3r4na90060.3860.7559No
125Selenopna90440.3840.7578No
126Thbs3na92550.3720.7566No
127Fn1na94330.3640.7560No
128Lama1na94930.3610.7574No
129Ptk2na96150.3540.7576No
130Shc1na96360.3530.7597No
131Rac3na96860.3500.7612No
132Pik3r1na99280.3370.7592No
133Map2k3na99730.3350.7607No
134Itga11na102400.3220.7582No
135Sos1na104130.3120.7573No
136Itga2bna105160.3060.7575No
137Rapgef1na112320.2710.7467No
138Ilkna112450.2700.7483No
139Mylkna113540.2640.7482No
140Ccnd1na113590.2640.7499No
141Arafna116450.2510.7465No
142Badna122120.2230.7380No
143Diaph1na123220.2190.7375No
144Pgfna123450.2180.7386No
145Col5a3na123730.2170.7396No
146Tnk1na123860.2160.7409No
147Mapk12na127630.1990.7356No
148Igf1na128020.1970.7362No
149Egfrna133420.1740.7278No
150Flt1na133990.1710.7280No
151Akt2na139470.1490.7193No
152Vtnna141900.1400.7159No
153Tesk2na142090.1390.7166No
154Ptk6na144580.1290.7130No
155Chadna148220.1130.7073No
156Bcar1na151630.1000.7020No
157Thbs4na160510.0710.6867No
158Map2k5na162660.0630.6833No
159Col4a4na166180.0520.6774No
160Itga7na174010.0350.6637No
161Col11a1na195230.0110.6261No
162Mylk2na198700.0090.6200No
163Itga10na199990.0080.6177No
164Tnnna215680.0010.5898No
165Ibspna340770.0000.3672No
166Shc3na364050.0000.3258No
167Col2a1na378740.0000.2997No
168Col11a2na49106-0.0000.0998No
169Vegfdna49767-0.0200.0882No
170Farp2na49883-0.0250.0864No
171Lama3na50656-0.0570.0730No
172Lamb3na50887-0.0670.0694No
173Map2k2na51670-0.1050.0562No
174Pelona52073-0.1280.0499No
175Ccnd3na52353-0.1460.0459No
176Vwfna53218-0.1970.0319No
177Tnrna53279-0.2000.0322No
178Egfna53335-0.2040.0326No
179Pak5na53452-0.2130.0320No
180Vegfana54197-0.2760.0206No
181Vegfbna54402-0.2930.0190No
182Tnk2na54625-0.3130.0172No
183Myl6na54873-0.3390.0151No
184Mapk4na56230-0.796-0.0036No
185Srmsna56275-0.9070.0018No
Table: GSEA details [plain text format]



Fig 2: WP_FOCAL_ADHESION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WP_FOCAL_ADHESION: Random ES distribution   
Gene set null distribution of ES for WP_FOCAL_ADHESION