Details for gene set BIOCARTA_41BB_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_41BB_PATHWAY
Enrichment Score (ES)	0.7016441
Normalized Enrichment Score (NES)	1.3083415
Nominal p-value	0.0970297
FDR q-value	0.78024906
FWER p-Value	0.617

Fig 1: Enrichment plot: BIOCARTA_41BB_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.2076	Yes
2	Map3k5	na	1264	0.636	0.3191	Yes
3	Nfkbia	na	2181	0.530	0.4121	Yes
4	Map4k5	na	3306	0.442	0.4833	Yes
5	Ikbkb	na	5353	0.323	0.5137	Yes
6	Atf2	na	5899	0.299	0.5657	Yes
7	Nfkb1	na	6802	0.262	0.6037	Yes
8	Mapk8	na	6919	0.258	0.6548	Yes
9	Tnfrsf9	na	7916	0.220	0.6825	Yes
10	Chuk	na	8968	0.183	0.7016	Yes
11	Mapk14	na	11085	0.115	0.6878	No
12	Rela	na	13587	0.049	0.6535	No
13	Il4	na	14518	0.032	0.6436	No
14	Map3k1	na	15852	0.016	0.6231	No
15	Ifng	na	46694	-0.005	0.0769	No
16	Traf2	na	47959	-0.036	0.0619	No
17	Tnfsf9	na	51266	-0.155	0.0351	No
18	Il2	na	53708	-0.269	0.0474	No

Fig 2: BIOCARTA_41BB_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_41BB_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_41BB_PATHWAY