Details for gene set BIOCARTA_AGR_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_AGR_PATHWAY
Enrichment Score (ES)	0.6752277
Normalized Enrichment Score (NES)	1.2707059
Nominal p-value	0.030549899
FDR q-value	0.50350624
FWER p-Value	0.671

Fig 1: Enrichment plot: BIOCARTA_AGR_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.1421	Yes
2	Agrn	na	1245	0.639	0.2137	Yes
3	Lama4	na	2171	0.531	0.2727	Yes
4	Git2	na	2435	0.509	0.3404	Yes
5	Itga1	na	2841	0.474	0.4006	Yes
6	Arhgef6	na	3543	0.425	0.4485	Yes
7	Dvl1	na	4416	0.372	0.4860	Yes
8	Cttn	na	5897	0.299	0.5022	Yes
9	Sp1	na	6904	0.258	0.5210	Yes
10	Mapk8	na	6919	0.258	0.5574	Yes
11	Utrn	na	7295	0.243	0.5853	Yes
12	Pak2	na	8306	0.207	0.5968	Yes
13	Lama1	na	8940	0.184	0.6117	Yes
14	Dmd	na	9003	0.182	0.6364	Yes
15	Mapk1	na	9328	0.171	0.6549	Yes
16	Mapk3	na	9505	0.165	0.6752	Yes
17	Chrm1	na	15209	0.023	0.5772	No
18	Acta1	na	16854	0.008	0.5492	No
19	Musk	na	18366	0.001	0.5226	No
20	Chrna1	na	24021	0.000	0.4222	No
21	Nrg3	na	39733	0.000	0.1434	No
22	Cdc42	na	46492	-0.001	0.0236	No
23	Itgb1	na	47154	-0.015	0.0140	No
24	Pak4	na	47231	-0.017	0.0150	No
25	Pak1	na	47966	-0.036	0.0071	No
26	Lama3	na	48739	-0.060	0.0019	No
27	Dag1	na	50041	-0.106	-0.0061	No
28	Lama2	na	50567	-0.126	0.0025	No
29	Egfr	na	51526	-0.166	0.0091	No
30	Rapsn	na	53177	-0.243	0.0142	No
31	Pak3	na	54188	-0.299	0.0388	No

Fig 2: BIOCARTA_AGR_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_AGR_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_AGR_PATHWAY