Details for gene set BIOCARTA_ATM_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_ATM_PATHWAY
Enrichment Score (ES)	0.69431335
Normalized Enrichment Score (NES)	1.3854487
Nominal p-value	0.020242915
FDR q-value	1.0
FWER p-Value	0.447

Fig 1: Enrichment plot: BIOCARTA_ATM_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.1823	Yes
2	Mdm2	na	1171	0.654	0.2830	Yes
3	Rad51	na	1604	0.592	0.3829	Yes
4	Nfkbia	na	2181	0.530	0.4688	Yes
5	Cdkn1a	na	4517	0.367	0.4939	Yes
6	Rad50	na	5303	0.325	0.5390	Yes
7	Nfkb1	na	6802	0.262	0.5600	Yes
8	Mapk8	na	6919	0.258	0.6047	Yes
9	Mre11a	na	7373	0.240	0.6402	Yes
10	Chek2	na	8807	0.189	0.6491	Yes
11	Abl1	na	8883	0.186	0.6815	Yes
12	Brca1	na	9760	0.156	0.6943	Yes
13	Trp53	na	12674	0.071	0.6554	No
14	Rela	na	13587	0.049	0.6481	No
15	Rpa1	na	17526	0.005	0.5790	No
16	Trp73	na	18233	0.002	0.5669	No
17	Chek1	na	50175	-0.111	0.0202	No
18	Nbn	na	51533	-0.166	0.0263	No
19	Gadd45a	na	54664	-0.329	0.0304	No

Fig 2: BIOCARTA_ATM_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_ATM_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_ATM_PATHWAY