Details for gene set BIOCARTA_EGF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_EGF_PATHWAY
Enrichment Score (ES)	0.64754045
Normalized Enrichment Score (NES)	1.2459164
Nominal p-value	0.16023166
FDR q-value	0.53170913
FWER p-Value	0.713

Fig 1: Enrichment plot: BIOCARTA_EGF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.1502	Yes
2	Fos	na	2187	0.529	0.1936	Yes
3	Elk1	na	2333	0.517	0.2686	Yes
4	Egf	na	3134	0.452	0.3222	Yes
5	Rasa1	na	3179	0.449	0.3888	Yes
6	Prkcb	na	6156	0.288	0.3792	Yes
7	Csnk2a2	na	6335	0.280	0.4181	Yes
8	Plcg1	na	6640	0.268	0.4528	Yes
9	Mapk8	na	6919	0.258	0.4865	Yes
10	Sos1	na	7003	0.254	0.5232	Yes
11	Pik3ca	na	7048	0.252	0.5602	Yes
12	Map2k1	na	9289	0.172	0.5463	Yes
13	Csnk2a1	na	9481	0.166	0.5677	Yes
14	Mapk3	na	9505	0.165	0.5920	Yes
15	Map2k4	na	9927	0.151	0.6071	Yes
16	Stat5a	na	10430	0.134	0.6184	Yes
17	Stat1	na	10488	0.133	0.6373	Yes
18	Jak1	na	10922	0.120	0.6475	Yes
19	Prkca	na	12711	0.069	0.6262	No
20	Raf1	na	13568	0.049	0.6184	No
21	Srf	na	15004	0.025	0.5967	No
22	Map3k1	na	15852	0.016	0.5840	No
23	Stat3	na	16389	0.011	0.5762	No
24	Grb2	na	47778	-0.030	0.0238	No
25	Shc1	na	48130	-0.041	0.0237	No
26	Pik3r1	na	49539	-0.088	0.0119	No
27	Egfr	na	51526	-0.166	0.0016	No
28	Hras	na	56113	-0.564	0.0047	No

Fig 2: BIOCARTA_EGF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_EGF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_EGF_PATHWAY