Details for gene set BIOCARTA_G1_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_G1_PATHWAY
Enrichment Score (ES)	0.66334283
Normalized Enrichment Score (NES)	1.3306178
Nominal p-value	0.04660194
FDR q-value	1.0
FWER p-Value	0.579

Fig 1: Enrichment plot: BIOCARTA_G1_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdk2	na	2571	0.496	0.0477	Yes
2	Cdk6	na	2621	0.492	0.1393	Yes
3	Cdkn1a	na	4517	0.367	0.1746	Yes
4	Tgfb1	na	4868	0.347	0.2336	Yes
5	Skp2	na	5059	0.337	0.2935	Yes
6	Smad3	na	5640	0.311	0.3416	Yes
7	Smad4	na	6084	0.291	0.3884	Yes
8	Atr	na	6589	0.270	0.4302	Yes
9	Cdkn2a	na	7091	0.251	0.4684	Yes
10	Cdc25a	na	7527	0.234	0.5047	Yes
11	Cdkn1b	na	7564	0.233	0.5478	Yes
12	Rb1	na	7593	0.232	0.5909	Yes
13	Dhfr	na	8052	0.215	0.6232	Yes
14	Abl1	na	8883	0.186	0.6435	Yes
15	Gsk3b	na	9507	0.165	0.6633	Yes
16	Tgfb3	na	11167	0.113	0.6551	No
17	E2f1	na	11779	0.095	0.6621	No
18	Trp53	na	12674	0.071	0.6595	No
19	Ccna1	na	37864	0.000	0.2125	No
20	Tfdp1	na	47229	-0.017	0.0495	No
21	Cdk1	na	47502	-0.024	0.0491	No
22	Ccnd1	na	49144	-0.074	0.0339	No
23	Cdkn2b	na	49964	-0.103	0.0388	No
24	Ccne1	na	50014	-0.105	0.0576	No
25	Cdk4	na	50241	-0.113	0.0748	No
26	Tgfb2	na	51902	-0.181	0.0794	No

Fig 2: BIOCARTA_G1_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_G1_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_G1_PATHWAY