Details for gene set BIOCARTA_NGF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_NGF_PATHWAY
Enrichment Score (ES)	0.6480345
Normalized Enrichment Score (NES)	1.2861056
Nominal p-value	0.08251473
FDR q-value	0.5719071
FWER p-Value	0.653

Fig 1: Enrichment plot: BIOCARTA_NGF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.1907	Yes
2	Fos	na	2187	0.529	0.2551	Yes
3	Elk1	na	2333	0.517	0.3507	Yes
4	Csnk2a2	na	6335	0.280	0.3328	Yes
5	Plcg1	na	6640	0.268	0.3782	Yes
6	Mapk8	na	6919	0.258	0.4222	Yes
7	Sos1	na	7003	0.254	0.4689	Yes
8	Pik3ca	na	7048	0.252	0.5159	Yes
9	Ngf	na	7970	0.218	0.5410	Yes
10	Ngfr	na	9049	0.180	0.5561	Yes
11	Map2k1	na	9289	0.172	0.5845	Yes
12	Csnk2a1	na	9481	0.166	0.6125	Yes
13	Mapk3	na	9505	0.165	0.6434	Yes
14	Pik3cg	na	10927	0.120	0.6408	Yes
15	Klk1b4	na	11592	0.100	0.6480	Yes
16	Raf1	na	13568	0.049	0.6223	No
17	Klk1b3	na	43828	0.000	0.0854	No
18	Grb2	na	47778	-0.030	0.0211	No
19	Shc1	na	48130	-0.041	0.0227	No
20	Pik3r1	na	49539	-0.088	0.0144	No
21	Hras	na	56113	-0.564	0.0047	No

Fig 2: BIOCARTA_NGF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NGF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NGF_PATHWAY