Details for gene set BIOCARTA_NKT_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	WT
GeneSet	BIOCARTA_NKT_PATHWAY
Enrichment Score (ES)	-0.34105405
Normalized Enrichment Score (NES)	-0.6972031
Nominal p-value	0.96737045
FDR q-value	0.93410254
FWER p-Value	0.996

Fig 1: Enrichment plot: BIOCARTA_NKT_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cxcr4	na	3118	0.454	0.0228	No
2	Il12rb2	na	3612	0.421	0.0865	No
3	Noct	na	3750	0.412	0.1550	No
4	Ccr7	na	4593	0.363	0.2026	No
5	Tgfb1	na	4868	0.347	0.2575	No
6	Ifngr2	na	5305	0.325	0.3059	No
7	Ccr5	na	8448	0.202	0.2849	No
8	Cd28	na	8627	0.195	0.3153	No
9	Tgfb3	na	11167	0.113	0.2897	No
10	Il12rb1	na	11418	0.105	0.3034	No
11	Cxcr3	na	12487	0.075	0.2974	No
12	Il4ra	na	12969	0.063	0.2998	No
13	Ifngr1	na	13808	0.044	0.2925	No
14	Il4	na	14518	0.032	0.2854	No
15	Il18r1	na	15369	0.021	0.2739	No
16	Il5	na	40358	0.000	-0.1695	No
17	Ifng	na	46694	-0.005	-0.2811	No
18	Ccl3	na	48587	-0.055	-0.3053	No
19	Ccr2	na	50603	-0.127	-0.3191	Yes
20	Ccr1	na	51766	-0.175	-0.3096	Yes
21	Tgfb2	na	51902	-0.181	-0.2808	Yes
22	Ccl4	na	52873	-0.225	-0.2592	Yes
23	Il2	na	53708	-0.269	-0.2276	Yes
24	Cd4	na	53959	-0.285	-0.1829	Yes
25	Csf2	na	54021	-0.289	-0.1343	Yes
26	Ccr3	na	55797	-0.470	-0.0849	Yes
27	Cd40lg	na	56087	-0.552	0.0051	Yes

Fig 2: BIOCARTA_NKT_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NKT_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NKT_PATHWAY