Details for gene set BIOCARTA_PDGF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___Cyp2c44KO_vs_WT.RPKM_matrix___Cyp2c44KO_vs_WT.cls #Cyp2c44KO_versus_WT
Phenotype	RPKM_matrix___Cyp2c44KO_vs_WT.cls#Cyp2c44KO_versus_WT
Upregulated in class	Cyp2c44KO
GeneSet	BIOCARTA_PDGF_PATHWAY
Enrichment Score (ES)	0.6685158
Normalized Enrichment Score (NES)	1.2645816
Nominal p-value	0.08678501
FDR q-value	0.5007475
FWER p-Value	0.678

Fig 1: Enrichment plot: BIOCARTA_PDGF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	na	157	1.020	0.1546	Yes
2	Fos	na	2187	0.529	0.2003	Yes
3	Elk1	na	2333	0.517	0.2775	Yes
4	Rasa1	na	3179	0.449	0.3318	Yes
5	Prkcb	na	6156	0.288	0.3233	Yes
6	Csnk2a2	na	6335	0.280	0.3634	Yes
7	Plcg1	na	6640	0.268	0.3993	Yes
8	Mapk8	na	6919	0.258	0.4341	Yes
9	Sos1	na	7003	0.254	0.4719	Yes
10	Pik3ca	na	7048	0.252	0.5100	Yes
11	Pdgfa	na	8947	0.184	0.5047	Yes
12	Map2k1	na	9289	0.172	0.5252	Yes
13	Csnk2a1	na	9481	0.166	0.5473	Yes
14	Mapk3	na	9505	0.165	0.5723	Yes
15	Map2k4	na	9927	0.151	0.5881	Yes
16	Stat5a	na	10430	0.134	0.5999	Yes
17	Stat1	na	10488	0.133	0.6194	Yes
18	Pdgfra	na	10595	0.130	0.6375	Yes
19	Jak1	na	10922	0.120	0.6501	Yes
20	Pik3cg	na	10927	0.120	0.6685	Yes
21	Prkca	na	12711	0.069	0.6476	No
22	Raf1	na	13568	0.049	0.6400	No
23	Srf	na	15004	0.025	0.6184	No
24	Map3k1	na	15852	0.016	0.6058	No
25	Stat3	na	16389	0.011	0.5980	No
26	Grb2	na	47778	-0.030	0.0457	No
27	Shc1	na	48130	-0.041	0.0458	No
28	Pik3r1	na	49539	-0.088	0.0344	No
29	Hras	na	56113	-0.564	0.0047	No

Fig 2: BIOCARTA_PDGF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_PDGF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PDGF_PATHWAY