Details for gene set BIOCARTA_CYTOKINE_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_CYTOKINE_PATHWAY
Enrichment Score (ES)	-0.60556275
Normalized Enrichment Score (NES)	-1.160602
Nominal p-value	0.2602459
FDR q-value	0.83717364
FWER p-Value	0.762

Fig 1: Enrichment plot: BIOCARTA_CYTOKINE_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tnf	na	1862	0.378	0.0804	No
2	Txlna	na	4209	0.236	0.1096	No
3	Il9	na	13325	0.000	-0.0521	No
4	Il17a	na	17623	0.000	-0.1283	No
5	Il3	na	23764	0.000	-0.2373	No
6	Ifna1	na	35502	0.000	-0.4455	No
7	Il6	na	39643	-0.005	-0.5176	No
8	Il13	na	39972	-0.007	-0.5213	No
9	Il5	na	40232	-0.009	-0.5233	No
10	Il4	na	41017	-0.017	-0.5320	No
11	Ifnb1	na	41430	-0.023	-0.5324	No
12	Il15	na	44712	-0.102	-0.5599	Yes
13	Il10	na	45386	-0.121	-0.5355	Yes
14	Il2	na	45987	-0.140	-0.5041	Yes
15	Il18	na	51708	-0.356	-0.4985	Yes
16	Il1a	na	53107	-0.436	-0.3925	Yes
17	Ifng	na	55200	-0.622	-0.2429	Yes
18	Il16	na	56175	-0.878	0.0036	Yes

Fig 2: BIOCARTA_CYTOKINE_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_CYTOKINE_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_CYTOKINE_PATHWAY