Details for gene set BIOCARTA_G2_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	PanKO
GeneSet	BIOCARTA_G2_PATHWAY
Enrichment Score (ES)	0.5232445
Normalized Enrichment Score (NES)	0.8487222
Nominal p-value	0.73388773
FDR q-value	1.0
FWER p-Value	0.95

Fig 1: Enrichment plot: BIOCARTA_G2_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdkn1a	na	669	0.525	0.0753	Yes
2	Cdc34	na	892	0.482	0.1515	Yes
3	Cdc25a	na	1224	0.440	0.2187	Yes
4	Ywhah	na	1540	0.406	0.2806	Yes
5	Gadd45a	na	1731	0.388	0.3417	Yes
6	Trp53	na	1824	0.382	0.4035	Yes
7	Mdm2	na	1925	0.372	0.4636	Yes
8	Ccnb1	na	4315	0.231	0.4596	Yes
9	Plk1	na	4661	0.216	0.4893	Yes
10	Cdc25c	na	5791	0.172	0.4980	Yes
11	Cdk1	na	5933	0.167	0.5232	Yes
12	Wee1	na	7386	0.116	0.5167	No
13	Chek1	na	8048	0.093	0.5205	No
14	Cdkn2d	na	9603	0.047	0.5008	No
15	Cdc25b	na	11141	0.011	0.4753	No
16	Myt1	na	23821	0.000	0.2504	No
17	Rps6ka1	na	42312	-0.038	-0.0714	No
18	Brca1	na	43356	-0.063	-0.0794	No
19	Ywhaq	na	47872	-0.203	-0.1259	No
20	Atr	na	52685	-0.410	-0.1431	No
21	Ep300	na	52812	-0.416	-0.0762	No
22	Prkdc	na	56112	-0.839	0.0047	No

Fig 2: BIOCARTA_G2_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_G2_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_G2_PATHWAY