Details for gene set BIOCARTA_NFKB_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	PanKO
GeneSet	BIOCARTA_NFKB_PATHWAY
Enrichment Score (ES)	0.5344691
Normalized Enrichment Score (NES)	0.9597156
Nominal p-value	0.5596869
FDR q-value	1.0
FWER p-Value	0.903

Fig 1: Enrichment plot: BIOCARTA_NFKB_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Myd88	na	969	0.472	0.0635	Yes
2	Il1r1	na	1144	0.449	0.1372	Yes
3	Rela	na	1185	0.444	0.2124	Yes
4	Map3k14	na	1283	0.433	0.2848	Yes
5	Tnf	na	1862	0.378	0.3391	Yes
6	Tnfaip3	na	2025	0.364	0.3983	Yes
7	Nfkb1	na	2363	0.340	0.4504	Yes
8	Tnfrsf1a	na	4055	0.243	0.4619	Yes
9	Ripk1	na	4254	0.234	0.4984	Yes
10	Map3k1	na	4404	0.226	0.5345	Yes
11	Ikbkg	na	6588	0.143	0.5202	No
12	Nfkbia	na	7521	0.111	0.5227	No
13	Tnfrsf1b	na	8826	0.070	0.5116	No
14	Irak1	na	42762	-0.049	-0.0823	No
15	Traf6	na	44459	-0.094	-0.0963	No
16	Ikbkb	na	44969	-0.109	-0.0866	No
17	Fadd	na	49452	-0.260	-0.1217	No
18	Map3k7	na	50220	-0.292	-0.0853	No
19	Chuk	na	51416	-0.344	-0.0477	No
20	Tradd	na	51741	-0.358	0.0078	No
21	Il1a	na	53107	-0.436	0.0580	No

Fig 2: BIOCARTA_NFKB_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NFKB_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NFKB_PATHWAY