Details for gene set BIOCARTA_P53_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	PanKO
GeneSet	BIOCARTA_P53_PATHWAY
Enrichment Score (ES)	0.673108
Normalized Enrichment Score (NES)	1.1092414
Nominal p-value	0.37551868
FDR q-value	1.0
FWER p-Value	0.799

Fig 1: Enrichment plot: BIOCARTA_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdkn1a	na	669	0.525	0.1250	Yes
2	Bax	na	1298	0.431	0.2263	Yes
3	Gadd45a	na	1731	0.388	0.3199	Yes
4	Ccne1	na	1795	0.383	0.4188	Yes
5	Trp53	na	1824	0.382	0.5178	Yes
6	Mdm2	na	1925	0.372	0.6129	Yes
7	Ccnd1	na	4671	0.215	0.6204	Yes
8	Cdk2	na	6111	0.161	0.6368	Yes
9	Cdk4	na	7175	0.123	0.6499	Yes
10	Timp3	na	7512	0.112	0.6731	Yes
11	E2f1	na	8922	0.067	0.6656	No
12	Pcna	na	9662	0.046	0.6644	No
13	Bcl2	na	42830	-0.050	0.0889	No
14	Apaf1	na	45664	-0.130	0.0727	No
15	Rb1	na	53345	-0.450	0.0538	No

Fig 2: BIOCARTA_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_P53_PATHWAY