Details for gene set BIOCARTA_PML_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	PanKO
GeneSet	BIOCARTA_PML_PATHWAY
Enrichment Score (ES)	0.5865801
Normalized Enrichment Score (NES)	1.0605326
Nominal p-value	0.43055555
FDR q-value	1.0
FWER p-Value	0.839

Fig 1: Enrichment plot: BIOCARTA_PML_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hras	na	295	0.620	0.1400	Yes
2	Sumo1	na	1628	0.398	0.2096	Yes
3	Trp53	na	1824	0.382	0.2955	Yes
4	Tnf	na	1862	0.378	0.3833	Yes
5	Fas	na	3278	0.283	0.4244	Yes
6	Tnfrsf1a	na	4055	0.243	0.4674	Yes
7	Daxx	na	5439	0.186	0.4864	Yes
8	Fasl	na	5866	0.169	0.5185	Yes
9	Rara	na	6035	0.164	0.5538	Yes
10	Sae1	na	6242	0.155	0.5866	Yes
11	Uba2	na	7934	0.097	0.5794	No
12	Tnfrsf1b	na	8826	0.070	0.5800	No
13	Pax3	na	39579	-0.004	0.0354	No
14	Crebbp	na	43516	-0.067	-0.0187	No
15	Sirt1	na	45580	-0.127	-0.0255	No
16	Sp100	na	47454	-0.187	-0.0151	No
17	Pml	na	50170	-0.290	0.0047	No
18	Rb1	na	53345	-0.450	0.0538	No

Fig 2: BIOCARTA_PML_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_PML_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PML_PATHWAY