Details for gene set BIOCARTA_PTEN_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO
Phenotype	RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_PTEN_PATHWAY
Enrichment Score (ES)	-0.7260802
Normalized Enrichment Score (NES)	-1.3004535
Nominal p-value	0.126
FDR q-value	1.0
FWER p-Value	0.607

Fig 1: Enrichment plot: BIOCARTA_PTEN_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bcar1	na	2819	0.310	0.0079	No
2	Itgb1	na	5773	0.173	-0.0121	No
3	Fasl	na	5866	0.169	0.0180	No
4	Akt1	na	9454	0.051	-0.0361	No
5	Mapk3	na	9547	0.049	-0.0286	No
6	Ilk	na	10468	0.024	-0.0404	No
7	Grb2	na	42417	-0.041	-0.5996	No
8	Shc1	na	43680	-0.071	-0.6087	No
9	Pik3ca	na	44386	-0.092	-0.6040	No
10	Pdpk1	na	51267	-0.337	-0.6630	Yes
11	Mapk1	na	52790	-0.415	-0.6123	Yes
12	Cdkn1b	na	53039	-0.431	-0.5361	Yes
13	Sos1	na	54092	-0.503	-0.4607	Yes
14	Pik3r1	na	54770	-0.569	-0.3663	Yes
15	Pdk2	na	55631	-0.693	-0.2519	Yes
16	Pten	na	55668	-0.700	-0.1215	Yes
17	Foxo3	na	55733	-0.717	0.0114	Yes

Fig 2: BIOCARTA_PTEN_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_PTEN_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PTEN_PATHWAY