Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO |
| Phenotype | RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO |
| Upregulated in class | ClusterKO |
| GeneSet | BIOCARTA_SHH_PATHWAY |
| Enrichment Score (ES) | -0.63126254 |
| Normalized Enrichment Score (NES) | -1.2277509 |
| Nominal p-value | 0.20874752 |
| FDR q-value | 0.99107283 |
| FWER p-Value | 0.695 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | Prkar1b | na | 1725 | 0.389 | 0.0572 | No |
| 2 | Gli2 | na | 5213 | 0.193 | 0.0389 | No |
| 3 | Gli3 | na | 6495 | 0.147 | 0.0493 | No |
| 4 | Dyrk1a | na | 6624 | 0.142 | 0.0791 | No |
| 5 | Gli1 | na | 7081 | 0.126 | 0.0994 | No |
| 6 | Prkar1a | na | 10650 | 0.020 | 0.0406 | No |
| 7 | Dyrk1b | na | 43267 | -0.061 | -0.5244 | No |
| 8 | Sufu | na | 46931 | -0.171 | -0.5508 | No |
| 9 | Gsk3b | na | 51467 | -0.346 | -0.5530 | Yes |
| 10 | Prkar2b | na | 52051 | -0.374 | -0.4789 | Yes |
| 11 | Smo | na | 52442 | -0.395 | -0.3966 | Yes |
| 12 | Prkar2a | na | 53850 | -0.484 | -0.3121 | Yes |
| 13 | Prkacb | na | 53927 | -0.491 | -0.2026 | Yes |
| 14 | Ptch1 | na | 54245 | -0.516 | -0.0917 | Yes |
| 15 | Shh | na | 54811 | -0.573 | 0.0278 | Yes |
