| Dataset | RPKM_matrix___PanKO_vs_ClusterKO.RPKM_matrix___PanKO_vs_ClusterKO.cls #PanKO_versus_ClusterKO |
| Phenotype | RPKM_matrix___PanKO_vs_ClusterKO.cls#PanKO_versus_ClusterKO |
| Upregulated in class | ClusterKO |
| GeneSet | WP_NUCLEAR_RECEPTORS |
| Enrichment Score (ES) | -0.67850053 |
| Normalized Enrichment Score (NES) | -1.2932674 |
| Nominal p-value | 0.12909836 |
| FDR q-value | 0.85468465 |
| FWER p-Value | 0.742 |

| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | Nr4a1 | na | 1215 | 0.441 | 0.0140 | No |
| 2 | Vdr | na | 1626 | 0.399 | 0.0389 | No |
| 3 | Pparg | na | 3656 | 0.264 | 0.0242 | No |
| 4 | Ppard | na | 4620 | 0.218 | 0.0247 | No |
| 5 | Hnf4a | na | 4859 | 0.208 | 0.0373 | No |
| 6 | Rara | na | 6035 | 0.164 | 0.0296 | No |
| 7 | Rarg | na | 8366 | 0.082 | -0.0051 | No |
| 8 | Nr1i2 | na | 9273 | 0.056 | -0.0167 | No |
| 9 | Pgr | na | 12031 | 0.001 | -0.0655 | No |
| 10 | Nr2e1 | na | 14317 | 0.000 | -0.1061 | No |
| 11 | Nr0b1 | na | 15047 | 0.000 | -0.1190 | No |
| 12 | Nr5a1 | na | 38772 | -0.000 | -0.5401 | No |
| 13 | Esr2 | na | 38882 | -0.001 | -0.5419 | No |
| 14 | Rora | na | 41229 | -0.020 | -0.5820 | No |
| 15 | Nr1i3 | na | 42803 | -0.049 | -0.6059 | No |
| 16 | Nr1h2 | na | 44136 | -0.084 | -0.6227 | No |
| 17 | Esr1 | na | 47279 | -0.181 | -0.6639 | Yes |
| 18 | Rxrg | na | 48093 | -0.210 | -0.6614 | Yes |
| 19 | Nr2c2 | na | 48734 | -0.233 | -0.6539 | Yes |
| 20 | Ar | na | 48881 | -0.238 | -0.6373 | Yes |
| 21 | Nr1h3 | na | 50034 | -0.284 | -0.6348 | Yes |
| 22 | Rxrb | na | 50244 | -0.293 | -0.6148 | Yes |
| 23 | Nr1d2 | na | 50695 | -0.312 | -0.5976 | Yes |
| 24 | Thra | na | 51226 | -0.336 | -0.5799 | Yes |
| 25 | Ror1 | na | 52129 | -0.378 | -0.5654 | Yes |
| 26 | Rarb | na | 52877 | -0.421 | -0.5447 | Yes |
| 27 | Rxra | na | 53485 | -0.460 | -0.5184 | Yes |
| 28 | Nr3c1 | na | 53720 | -0.475 | -0.4842 | Yes |
| 29 | Nr4a2 | na | 54232 | -0.515 | -0.4517 | Yes |
| 30 | Thrb | na | 54539 | -0.544 | -0.4132 | Yes |
| 31 | Nr2f6 | na | 54681 | -0.558 | -0.3706 | Yes |
| 32 | Esrra | na | 54882 | -0.582 | -0.3272 | Yes |
| 33 | Rorc | na | 55114 | -0.611 | -0.2819 | Yes |
| 34 | Ppara | na | 55406 | -0.651 | -0.2345 | Yes |
| 35 | Nr2f2 | na | 55468 | -0.661 | -0.1822 | Yes |
| 36 | Nr5a2 | na | 55543 | -0.674 | -0.1291 | Yes |
| 37 | Nr2f1 | na | 56106 | -0.837 | -0.0715 | Yes |
| 38 | Esrrb | na | 56236 | -0.945 | 0.0025 | Yes |

