Details for gene set BIOCARTA_FMLP_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_Cyp2c44KO.RPKM_matrix___PanKO_vs_Cyp2c44KO.cls #PanKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___PanKO_vs_Cyp2c44KO.cls#PanKO_versus_Cyp2c44KO
Upregulated in class	PanKO
GeneSet	BIOCARTA_FMLP_PATHWAY
Enrichment Score (ES)	0.7723281
Normalized Enrichment Score (NES)	1.3823596
Nominal p-value	0.004032258
FDR q-value	0.18395415
FWER p-Value	0.33

Fig 1: Enrichment plot: BIOCARTA_FMLP_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Nfatc2	na	210	1.406	0.0776	Yes
2	Ncf2	na	257	1.367	0.1559	Yes
3	Map3k1	na	479	1.210	0.2219	Yes
4	Pak1	na	677	1.125	0.2835	Yes
5	Rela	na	885	1.044	0.3403	Yes
6	Gna15	na	1028	0.993	0.3952	Yes
7	Hras	na	1162	0.948	0.4477	Yes
8	Ncf1	na	1293	0.911	0.4981	Yes
9	Nfkb1	na	1428	0.883	0.5468	Yes
10	Nfatc4	na	1645	0.835	0.5913	Yes
11	Calm3	na	1707	0.822	0.6377	Yes
12	Map2k3	na	2317	0.728	0.6690	Yes
13	Camk2a	na	2386	0.718	0.7094	Yes
14	Calm1	na	2707	0.673	0.7426	Yes
15	Mapk3	na	3072	0.625	0.7723	Yes
16	Elk1	na	6528	0.354	0.7315	No
17	Raf1	na	6534	0.354	0.7519	No
18	Map2k2	na	8516	0.252	0.7313	No
19	Nfkbia	na	8751	0.243	0.7412	No
20	Nfatc1	na	9977	0.191	0.7305	No
21	Map2k1	na	10319	0.174	0.7345	No
22	Nfatc3	na	11726	0.112	0.7160	No
23	Mapk1	na	12870	0.070	0.6998	No
24	Ppp3cb	na	13325	0.056	0.6950	No
25	Plcb1	na	13596	0.046	0.6929	No
26	Ppp3cc	na	47960	-0.116	0.0897	No
27	Mapk14	na	48960	-0.162	0.0814	No
28	Fpr1	na	48970	-0.162	0.0906	No
29	Ppp3ca	na	49962	-0.211	0.0852	No
30	Pik3c2g	na	50098	-0.219	0.0955	No
31	Map2k6	na	51082	-0.276	0.0940	No

Fig 2: BIOCARTA_FMLP_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_FMLP_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_FMLP_PATHWAY