Details for gene set BIOCARTA_INTRINSIC_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_Cyp2c44KO.RPKM_matrix___PanKO_vs_Cyp2c44KO.cls #PanKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___PanKO_vs_Cyp2c44KO.cls#PanKO_versus_Cyp2c44KO
Upregulated in class	PanKO
GeneSet	BIOCARTA_INTRINSIC_PATHWAY
Enrichment Score (ES)	0.6885126
Normalized Enrichment Score (NES)	1.3324406
Nominal p-value	0.030674847
FDR q-value	0.21734507
FWER p-Value	0.472

Fig 1: Enrichment plot: BIOCARTA_INTRINSIC_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Col4a1	na	180	1.436	0.1144	Yes
2	Col4a2	na	610	1.151	0.2011	Yes
3	Col4a5	na	787	1.077	0.2862	Yes
4	Col4a6	na	961	1.012	0.3660	Yes
5	Pros1	na	1351	0.898	0.4327	Yes
6	Fga	na	2005	0.769	0.4841	Yes
7	Fgg	na	2018	0.767	0.5467	Yes
8	Fgb	na	2037	0.765	0.6091	Yes
9	F2r	na	3742	0.555	0.6244	Yes
10	F9	na	5343	0.428	0.6310	Yes
11	Serping1	na	5734	0.402	0.6570	Yes
12	F10	na	7313	0.312	0.6546	Yes
13	Kng1	na	8627	0.248	0.6516	Yes
14	Col4a3	na	9444	0.212	0.6545	Yes
15	Serpinc1	na	9501	0.209	0.6706	Yes
16	F12	na	9538	0.208	0.6870	Yes
17	Col4a4	na	10310	0.174	0.6876	Yes
18	F2	na	10931	0.146	0.6885	Yes
19	Proc	na	13498	0.050	0.6470	No
20	F11	na	46167	-0.047	0.0712	No
21	F5	na	46205	-0.048	0.0745	No
22	Klkb1	na	48076	-0.121	0.0513	No
23	F8	na	56132	-1.172	0.0043	No

Fig 2: BIOCARTA_INTRINSIC_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_INTRINSIC_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_INTRINSIC_PATHWAY