Details for gene set BIOCARTA_NKT_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_Cyp2c44KO.RPKM_matrix___PanKO_vs_Cyp2c44KO.cls #PanKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___PanKO_vs_Cyp2c44KO.cls#PanKO_versus_Cyp2c44KO
Upregulated in class	PanKO
GeneSet	BIOCARTA_NKT_PATHWAY
Enrichment Score (ES)	0.76837504
Normalized Enrichment Score (NES)	1.4661067
Nominal p-value	0.0020533882
FDR q-value	0.09980642
FWER p-Value	0.107

Fig 1: Enrichment plot: BIOCARTA_NKT_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccl4	na	3	2.016	0.1161	Yes
2	Ccr2	na	223	1.399	0.1928	Yes
3	Ccr3	na	401	1.256	0.2621	Yes
4	Ifngr1	na	411	1.249	0.3339	Yes
5	Tgfb3	na	475	1.212	0.4026	Yes
6	Cxcr4	na	546	1.174	0.4690	Yes
7	Tgfb2	na	643	1.137	0.5327	Yes
8	Ccl3	na	971	1.009	0.5851	Yes
9	Tgfb1	na	1049	0.985	0.6405	Yes
10	Ccr1	na	1141	0.955	0.6939	Yes
11	Ifngr2	na	1664	0.831	0.7325	Yes
12	Il4ra	na	3405	0.587	0.7354	Yes
13	Ccr5	na	3441	0.583	0.7684	Yes
14	Ccr7	na	5737	0.402	0.7508	No
15	Il12rb2	na	8140	0.271	0.7237	No
16	Csf2	na	8183	0.268	0.7385	No
17	Noct	na	9707	0.199	0.7229	No
18	Il2	na	11886	0.105	0.6903	No
19	Cxcr3	na	13400	0.053	0.6665	No
20	Il5	na	37779	0.000	0.2339	No
21	Il4	na	45592	-0.032	0.0971	No
22	Il18r1	na	47545	-0.098	0.0681	No
23	Cd4	na	47878	-0.113	0.0687	No
24	Ifng	na	50728	-0.255	0.0329	No
25	Cd40lg	na	51135	-0.279	0.0417	No
26	Cd28	na	52309	-0.358	0.0415	No
27	Il12rb1	na	54130	-0.532	0.0399	No

Fig 2: BIOCARTA_NKT_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NKT_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NKT_PATHWAY