Details for gene set BIOCARTA_NTHI_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_Cyp2c44KO.RPKM_matrix___PanKO_vs_Cyp2c44KO.cls #PanKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___PanKO_vs_Cyp2c44KO.cls#PanKO_versus_Cyp2c44KO
Upregulated in class	PanKO
GeneSet	BIOCARTA_NTHI_PATHWAY
Enrichment Score (ES)	0.7659914
Normalized Enrichment Score (NES)	1.3697584
Nominal p-value	0.0186722
FDR q-value	0.17783213
FWER p-Value	0.367

Fig 1: Enrichment plot: BIOCARTA_NTHI_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tgfbr2	na	218	1.401	0.1067	Yes
2	Map3k14	na	244	1.382	0.2153	Yes
3	Smad3	na	843	1.058	0.2882	Yes
4	Il1b	na	869	1.049	0.3706	Yes
5	Rela	na	885	1.044	0.4527	Yes
6	Tgfbr1	na	1059	0.981	0.5271	Yes
7	Tnf	na	1179	0.945	0.5996	Yes
8	Nfkb1	na	1428	0.883	0.6649	Yes
9	Myd88	na	2121	0.753	0.7120	Yes
10	Map2k3	na	2317	0.728	0.7660	Yes
11	Mapk11	na	8546	0.251	0.6753	No
12	Nfkbia	na	8751	0.243	0.6908	No
13	Smad4	na	10061	0.187	0.6824	No
14	Ikbkb	na	10197	0.180	0.6941	No
15	Nr3c1	na	12131	0.096	0.6674	No
16	Crebbp	na	14364	0.023	0.6296	No
17	Map3k7	na	46467	-0.056	0.0645	No
18	Chuk	na	48301	-0.131	0.0423	No
19	Ep300	na	48731	-0.150	0.0466	No
20	Mapk14	na	48960	-0.162	0.0553	No
21	Map2k6	na	51082	-0.276	0.0394	No
22	Dusp1	na	55046	-0.691	0.0236	No

Fig 2: BIOCARTA_NTHI_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NTHI_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NTHI_PATHWAY