Details for gene set BIOCARTA_41BB_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	PanKO
GeneSet	BIOCARTA_41BB_PATHWAY
Enrichment Score (ES)	0.8378994
Normalized Enrichment Score (NES)	1.421982
Nominal p-value	0.0
FDR q-value	0.0850151
FWER p-Value	0.153

Fig 1: Enrichment plot: BIOCARTA_41BB_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Map3k1	na	499	1.220	0.1014	Yes
2	Traf2	na	815	1.098	0.1950	Yes
3	Rela	na	840	1.090	0.2930	Yes
4	Nfkb1	na	1104	1.005	0.3792	Yes
5	Jun	na	1278	0.959	0.4627	Yes
6	Map3k5	na	1892	0.829	0.5267	Yes
7	Nfkbia	na	2180	0.779	0.5920	Yes
8	Map4k5	na	2750	0.705	0.6456	Yes
9	Tnfrsf9	na	3267	0.645	0.6948	Yes
10	Atf2	na	3980	0.577	0.7342	Yes
11	Mapk8	na	4468	0.534	0.7738	Yes
12	Ikbkb	na	4887	0.502	0.8118	Yes
13	Tnfsf9	na	5695	0.448	0.8379	Yes
14	Chuk	na	14191	0.059	0.6925	No
15	Il4	na	42217	0.000	0.1952	No
16	Mapk14	na	48942	-0.047	0.0801	No
17	Il2	na	52594	-0.225	0.0356	No
18	Ifng	na	54235	-0.348	0.0380	No

Fig 2: BIOCARTA_41BB_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_41BB_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_41BB_PATHWAY