Details for gene set BIOCARTA_NKT_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	PanKO
GeneSet	BIOCARTA_NKT_PATHWAY
Enrichment Score (ES)	0.8093641
Normalized Enrichment Score (NES)	1.472961
Nominal p-value	0.001908397
FDR q-value	0.12757926
FWER p-Value	0.059

Fig 1: Enrichment plot: BIOCARTA_NKT_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccl4	na	16	1.780	0.0942	Yes
2	Ccr2	na	255	1.367	0.1625	Yes
3	Cxcr4	na	260	1.363	0.2347	Yes
4	Ifngr1	na	348	1.299	0.3021	Yes
5	Ifngr2	na	360	1.293	0.3705	Yes
6	Tgfb1	na	464	1.234	0.4341	Yes
7	Tgfb3	na	735	1.123	0.4889	Yes
8	Tgfb2	na	976	1.049	0.5403	Yes
9	Ccl3	na	1283	0.958	0.5857	Yes
10	Ccr1	na	1540	0.901	0.6290	Yes
11	Ccr5	na	2206	0.776	0.6583	Yes
12	Ccr3	na	2968	0.679	0.6808	Yes
13	Il4ra	na	3234	0.649	0.7105	Yes
14	Il12rb2	na	3322	0.640	0.7430	Yes
15	Noct	na	3323	0.640	0.7769	Yes
16	Ccr7	na	3389	0.633	0.8094	Yes
17	Cxcr3	na	12280	0.120	0.6580	No
18	Il4	na	42217	0.000	0.1267	No
19	Il5	na	45296	0.000	0.0721	No
20	Csf2	na	47574	-0.010	0.0322	No
21	Il18r1	na	49357	-0.063	0.0040	No
22	Cd28	na	51745	-0.179	-0.0289	No
23	Il2	na	52594	-0.225	-0.0320	No
24	Ifng	na	54235	-0.348	-0.0427	No
25	Cd4	na	54577	-0.384	-0.0284	No
26	Il12rb1	na	54926	-0.432	-0.0116	No
27	Cd40lg	na	56014	-0.704	0.0064	No

Fig 2: BIOCARTA_NKT_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NKT_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NKT_PATHWAY