Details for gene set BIOCARTA_NTHI_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	PanKO
GeneSet	BIOCARTA_NTHI_PATHWAY
Enrichment Score (ES)	0.8405992
Normalized Enrichment Score (NES)	1.4374396
Nominal p-value	0.0
FDR q-value	0.13480204
FWER p-Value	0.124

Fig 1: Enrichment plot: BIOCARTA_NTHI_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tgfbr2	na	55	1.611	0.1100	Yes
2	Map3k14	na	318	1.317	0.1960	Yes
3	Smad3	na	566	1.191	0.2736	Yes
4	Rela	na	840	1.090	0.3439	Yes
5	Il1b	na	849	1.088	0.4186	Yes
6	Tgfbr1	na	858	1.084	0.4931	Yes
7	Nfkb1	na	1104	1.005	0.5580	Yes
8	Tnf	na	1764	0.854	0.6051	Yes
9	Nfkbia	na	2180	0.779	0.6514	Yes
10	Mapk11	na	2792	0.701	0.6889	Yes
11	Map2k3	na	4439	0.536	0.6966	Yes
12	Smad4	na	4830	0.507	0.7246	Yes
13	Ikbkb	na	4887	0.502	0.7582	Yes
14	Ep300	na	4917	0.500	0.7921	Yes
15	Myd88	na	5121	0.486	0.8219	Yes
16	Crebbp	na	5782	0.441	0.8406	Yes
17	Nr3c1	na	9919	0.221	0.7824	No
18	Map3k7	na	12299	0.120	0.7484	No
19	Chuk	na	14191	0.059	0.7189	No
20	Dusp1	na	15314	0.034	0.7014	No
21	Mapk14	na	48942	-0.047	0.1079	No
22	Map2k6	na	54238	-0.349	0.0380	No

Fig 2: BIOCARTA_NTHI_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NTHI_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NTHI_PATHWAY