Details for gene set BIOCARTA_NUCLEARRS_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	WT
GeneSet	BIOCARTA_NUCLEARRS_PATHWAY
Enrichment Score (ES)	-0.54557604
Normalized Enrichment Score (NES)	-1.1416907
Nominal p-value	0.26494023
FDR q-value	0.19958645
FWER p-Value	0.722

Fig 1: Enrichment plot: BIOCARTA_NUCLEARRS_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Abcg1	na	553	1.198	0.0556	No
2	Rarg	na	772	1.112	0.1124	No
3	Vdr	na	1335	0.947	0.1541	No
4	Abcb1a	na	2572	0.728	0.1719	No
5	Abcb1b	na	2586	0.726	0.2113	No
6	Cyp3a11	na	3480	0.622	0.2294	No
7	Cyp27b1	na	3956	0.579	0.2526	No
8	Rarb	na	6318	0.406	0.2328	No
9	Cyp24a1	na	11131	0.168	0.1566	No
10	Rara	na	11635	0.145	0.1556	No
11	Abca1	na	12612	0.108	0.1441	No
12	Nr0b2	na	12962	0.096	0.1432	No
13	Abcb11	na	16387	0.018	0.0834	No
14	Cyp1a2	na	16838	0.012	0.0761	No
15	Abcc2	na	47938	-0.018	-0.4749	No
16	Abcd2	na	49972	-0.087	-0.5062	No
17	Nr1i2	na	50099	-0.094	-0.5034	No
18	Cyp4a12b	na	50319	-0.103	-0.5016	No
19	Pparg	na	50619	-0.119	-0.5004	No
20	Abcg5	na	50653	-0.121	-0.4944	No
21	Nr1h3	na	50853	-0.131	-0.4908	No
22	Ppard	na	51935	-0.188	-0.4997	No
23	Abcc3	na	53096	-0.260	-0.5061	No
24	Ppara	na	55321	-0.496	-0.5185	Yes
25	Abcd3	na	55420	-0.517	-0.4920	Yes
26	Nr1h4	na	55554	-0.549	-0.4644	Yes
27	Cyp26a1	na	55591	-0.559	-0.4345	Yes
28	Nr1i3	na	56088	-0.767	-0.4015	Yes
29	Cyp4b1	na	56102	-0.776	-0.3593	Yes
30	Cyp2e1	na	56174	-0.819	-0.3159	Yes
31	Cyp8b1	na	56369	-1.582	-0.2330	Yes
32	Cyp2c70	na	56377	-4.271	0.0000	Yes

Fig 2: BIOCARTA_NUCLEARRS_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NUCLEARRS_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NUCLEARRS_PATHWAY