Details for gene set BIOCARTA_STRESS_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	PanKO
GeneSet	BIOCARTA_STRESS_PATHWAY
Enrichment Score (ES)	0.78319913
Normalized Enrichment Score (NES)	1.3628477
Nominal p-value	0.0056390977
FDR q-value	0.08263491
FWER p-Value	0.341

Fig 1: Enrichment plot: BIOCARTA_STRESS_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Map3k14	na	318	1.317	0.0822	Yes
2	Map3k1	na	499	1.220	0.1604	Yes
3	Traf2	na	815	1.098	0.2281	Yes
4	Rela	na	840	1.090	0.3004	Yes
5	Nfkb1	na	1104	1.005	0.3628	Yes
6	Jun	na	1278	0.959	0.4237	Yes
7	Tnfrsf1a	na	1583	0.893	0.4779	Yes
8	Tnf	na	1764	0.854	0.5317	Yes
9	Nfkbia	na	2180	0.779	0.5763	Yes
10	Casp2	na	3037	0.672	0.6060	Yes
11	Ripk1	na	4046	0.570	0.6261	Yes
12	Map2k3	na	4439	0.536	0.6550	Yes
13	Mapk8	na	4468	0.534	0.6901	Yes
14	Ikbkg	na	4743	0.514	0.7195	Yes
15	Ikbkb	na	4887	0.502	0.7505	Yes
16	Map2k4	na	5148	0.484	0.7782	Yes
17	Atf1	na	6828	0.377	0.7735	Yes
18	Tank	na	7548	0.336	0.7832	Yes
19	Chuk	na	14191	0.059	0.6692	No
20	Tradd	na	14355	0.055	0.6700	No
21	Mapk14	na	48942	-0.047	0.0594	No
22	Map4k2	na	49703	-0.077	0.0510	No
23	Map2k6	na	54238	-0.349	-0.0061	No
24	Cradd	na	55918	-0.661	0.0081	No

Fig 2: BIOCARTA_STRESS_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_STRESS_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_STRESS_PATHWAY