Details for gene set REACTOME_MITOCHONDRIAL_BIOGENESIS[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_WT.RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Phenotype	RPKM_matrix___PanKO_vs_WT.cls#PanKO_versus_WT
Upregulated in class	WT
GeneSet	REACTOME_MITOCHONDRIAL_BIOGENESIS
Enrichment Score (ES)	-0.6327631
Normalized Enrichment Score (NES)	-1.1218412
Nominal p-value	0.34241244
FDR q-value	0.77165043
FWER p-Value	0.998

Fig 1: Enrichment plot: REACTOME_MITOCHONDRIAL_BIOGENESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gabpb1	na	2922	0.685	0.0564	No
2	Atp5l	na	9234	0.251	-0.0159	No
3	Gabpa	na	9986	0.218	0.0052	No
4	Dmac2l	na	10922	0.176	0.0165	No
5	Idh2	na	11078	0.170	0.0405	No
6	Cycs	na	15064	0.039	-0.0240	No
7	Atp5b	na	15118	0.038	-0.0189	No
8	Atp5pb	na	16174	0.020	-0.0344	No
9	Glud1	na	16757	0.013	-0.0426	No
10	Atp5g3	na	47757	-0.014	-0.5905	No
11	Gm10053	na	47800	-0.015	-0.5890	No
12	mt-Atp6	na	48305	-0.028	-0.5935	No
13	Atp5e	na	48597	-0.035	-0.5932	No
14	mt-Atp8	na	50830	-0.130	-0.6122	Yes
15	Atp5c1	na	51070	-0.142	-0.5940	Yes
16	Atp5g1	na	51151	-0.146	-0.5723	Yes
17	Atp5h	na	51220	-0.149	-0.5499	Yes
18	Atp5k	na	51740	-0.178	-0.5309	Yes
19	Atp5j2	na	52144	-0.198	-0.5069	Yes
20	Atp5a1	na	52176	-0.199	-0.4759	Yes
21	Atp5j	na	52311	-0.208	-0.4454	Yes
22	Sod2	na	52543	-0.222	-0.4144	Yes
23	Sirt4	na	52936	-0.249	-0.3821	Yes
24	Atp5o	na	53037	-0.256	-0.3433	Yes
25	Atp5d	na	53377	-0.279	-0.3052	Yes
26	Sirt5	na	55459	-0.526	-0.2590	Yes
27	Sirt3	na	55908	-0.656	-0.1633	Yes
28	Acss2	na	56311	-1.086	0.0012	Yes

Fig 2: REACTOME_MITOCHONDRIAL_BIOGENESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REACTOME_MITOCHONDRIAL_BIOGENESIS: Random ES distribution   
Gene set null distribution of ES for REACTOME_MITOCHONDRIAL_BIOGENESIS