##================================================================== ## Beginning of track view of Dataset NOV0208 (mm10) ##------------------------------------------------------------------ ## mm10 NOV0208 Unstranded RNAseq track NOV0208L2FL compositeTrack on shortLabel NOV0208L2FL Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NOV0208L2FL priority 2000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ KO=KO \ WT=WT subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0208L2FLView1 parent NOV0208L2FL shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track KO1_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO1_str1.bw shortLabel KO1_str1.s0_coverage longLabel KO1_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO2_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO2_str1.bw shortLabel KO2_str1.s0_coverage longLabel KO2_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO3_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO3_str1.bw shortLabel KO3_str1.s0_coverage longLabel KO3_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO4_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO4_str1.bw shortLabel KO4_str1.s0_coverage longLabel KO4_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO5_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO5_str1.bw shortLabel KO5_str1.s0_coverage longLabel KO5_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO6_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO6_str1.bw shortLabel KO6_str1.s0_coverage longLabel KO6_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO7_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO7_str1.bw shortLabel KO7_str1.s0_coverage longLabel KO7_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track KO8_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl KO8_str1.bw shortLabel KO8_str1.s0_coverage longLabel KO8_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT1_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT1_str1.bw shortLabel WT1_str1.s0_coverage longLabel WT1_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2092 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT2_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT2_str1.bw shortLabel WT2_str1.s0_coverage longLabel WT2_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT3_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT3_str1.bw shortLabel WT3_str1.s0_coverage longLabel WT3_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2112 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT4_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT4_str1.bw shortLabel WT4_str1.s0_coverage longLabel WT4_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2122 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT5_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT5_str1.bw shortLabel WT5_str1.s0_coverage longLabel WT5_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2132 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT6_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT6_str1.bw shortLabel WT6_str1.s0_coverage longLabel WT6_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2142 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT7_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT7_str1.bw shortLabel WT7_str1.s0_coverage longLabel WT7_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2152 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WT8_str1.s0_coverage parent NOV0208L2FLView1 on bigDataUrl WT8_str1.bw shortLabel WT8_str1.s0_coverage longLabel WT8_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2162 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0208L2FLView2 parent NOV0208L2FL shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track KO1_junctions parent NOV0208L2FLView2 on bigDataUrl KO1.bb shortLabel KO1 junctions longLabel KO1 junctions type bigBed 12 visibility pack priority 2172 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO2_junctions parent NOV0208L2FLView2 on bigDataUrl KO2.bb shortLabel KO2 junctions longLabel KO2 junctions type bigBed 12 visibility pack priority 2182 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO3_junctions parent NOV0208L2FLView2 on bigDataUrl KO3.bb shortLabel KO3 junctions longLabel KO3 junctions type bigBed 12 visibility pack priority 2192 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO4_junctions parent NOV0208L2FLView2 on bigDataUrl KO4.bb shortLabel KO4 junctions longLabel KO4 junctions type bigBed 12 visibility pack priority 2202 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO5_junctions parent NOV0208L2FLView2 on bigDataUrl KO5.bb shortLabel KO5 junctions longLabel KO5 junctions type bigBed 12 visibility pack priority 2212 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO6_junctions parent NOV0208L2FLView2 on bigDataUrl KO6.bb shortLabel KO6 junctions longLabel KO6 junctions type bigBed 12 visibility pack priority 2222 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO7_junctions parent NOV0208L2FLView2 on bigDataUrl KO7.bb shortLabel KO7 junctions longLabel KO7 junctions type bigBed 12 visibility pack priority 2232 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track KO8_junctions parent NOV0208L2FLView2 on bigDataUrl KO8.bb shortLabel KO8 junctions longLabel KO8 junctions type bigBed 12 visibility pack priority 2242 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT1_junctions parent NOV0208L2FLView2 on bigDataUrl WT1.bb shortLabel WT1 junctions longLabel WT1 junctions type bigBed 12 visibility pack priority 2252 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT2_junctions parent NOV0208L2FLView2 on bigDataUrl WT2.bb shortLabel WT2 junctions longLabel WT2 junctions type bigBed 12 visibility pack priority 2262 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT3_junctions parent NOV0208L2FLView2 on bigDataUrl WT3.bb shortLabel WT3 junctions longLabel WT3 junctions type bigBed 12 visibility pack priority 2272 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT4_junctions parent NOV0208L2FLView2 on bigDataUrl WT4.bb shortLabel WT4 junctions longLabel WT4 junctions type bigBed 12 visibility pack priority 2282 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT5_junctions parent NOV0208L2FLView2 on bigDataUrl WT5.bb shortLabel WT5 junctions longLabel WT5 junctions type bigBed 12 visibility pack priority 2292 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT6_junctions parent NOV0208L2FLView2 on bigDataUrl WT6.bb shortLabel WT6 junctions longLabel WT6 junctions type bigBed 12 visibility pack priority 2302 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT7_junctions parent NOV0208L2FLView2 on bigDataUrl WT7.bb shortLabel WT7 junctions longLabel WT7 junctions type bigBed 12 visibility pack priority 2312 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WT8_junctions parent NOV0208L2FLView2 on bigDataUrl WT8.bb shortLabel WT8 junctions longLabel WT8 junctions type bigBed 12 visibility pack priority 2322 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC