##================================================================== ## Beginning of track view of Dataset NOV0095 (mm10) ##------------------------------------------------------------------ ## mm10 NOV0095 Unstranded RNAseq track NOV0095L2fetalliver compositeTrack on shortLabel NOV0095L2fetalliver Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NOV0095L2fetalliver priority 2000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ L2WT=L2WT \ L2KO=L2KO subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0095L2fetalliverView1 parent NOV0095L2fetalliver shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track L2WTxRep1_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2WTxRep1_str1.bw shortLabel L2WTxRep1_str1.s0_coverage longLabel L2WTxRep1_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2WTxRep2_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2WTxRep2_str1.bw shortLabel L2WTxRep2_str1.s0_coverage longLabel L2WTxRep2_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2WTxRep3_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2WTxRep3_str1.bw shortLabel L2WTxRep3_str1.s0_coverage longLabel L2WTxRep3_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2WTxRep4_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2WTxRep4_str1.bw shortLabel L2WTxRep4_str1.s0_coverage longLabel L2WTxRep4_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2WTxRep5_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2WTxRep5_str1.bw shortLabel L2WTxRep5_str1.s0_coverage longLabel L2WTxRep5_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2KOxRep1_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2KOxRep1_str1.bw shortLabel L2KOxRep1_str1.s0_coverage longLabel L2KOxRep1_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2KOxRep2_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2KOxRep2_str1.bw shortLabel L2KOxRep2_str1.s0_coverage longLabel L2KOxRep2_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2KOxRep3_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2KOxRep3_str1.bw shortLabel L2KOxRep3_str1.s0_coverage longLabel L2KOxRep3_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2KOxRep4_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2KOxRep4_str1.bw shortLabel L2KOxRep4_str1.s0_coverage longLabel L2KOxRep4_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2092 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2KO Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track L2KOxRep5_str1.s0_coverage parent NOV0095L2fetalliverView1 on bigDataUrl L2KOxRep5_str1.bw shortLabel L2KOxRep5_str1.s0_coverage longLabel L2KOxRep5_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 2102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=L2KO Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0095L2fetalliverView2 parent NOV0095L2fetalliver shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track L2WTxRep1_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2WTxRep1.bb shortLabel L2WTxRep1 junctions longLabel L2WTxRep1 junctions type bigBed 12 visibility pack priority 2112 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2WTxRep2_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2WTxRep2.bb shortLabel L2WTxRep2 junctions longLabel L2WTxRep2 junctions type bigBed 12 visibility pack priority 2122 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2WTxRep3_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2WTxRep3.bb shortLabel L2WTxRep3 junctions longLabel L2WTxRep3 junctions type bigBed 12 visibility pack priority 2132 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2WTxRep4_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2WTxRep4.bb shortLabel L2WTxRep4 junctions longLabel L2WTxRep4 junctions type bigBed 12 visibility pack priority 2142 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2WTxRep5_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2WTxRep5.bb shortLabel L2WTxRep5 junctions longLabel L2WTxRep5 junctions type bigBed 12 visibility pack priority 2152 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2KOxRep1_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2KOxRep1.bb shortLabel L2KOxRep1 junctions longLabel L2KOxRep1 junctions type bigBed 12 visibility pack priority 2162 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2KOxRep2_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2KOxRep2.bb shortLabel L2KOxRep2 junctions longLabel L2KOxRep2 junctions type bigBed 12 visibility pack priority 2172 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2KOxRep3_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2KOxRep3.bb shortLabel L2KOxRep3 junctions longLabel L2KOxRep3 junctions type bigBed 12 visibility pack priority 2182 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2KOxRep4_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2KOxRep4.bb shortLabel L2KOxRep4 junctions longLabel L2KOxRep4 junctions type bigBed 12 visibility pack priority 2192 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2KO Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track L2KOxRep5_junctions parent NOV0095L2fetalliverView2 on bigDataUrl L2KOxRep5.bb shortLabel L2KOxRep5 junctions longLabel L2KOxRep5 junctions type bigBed 12 visibility pack priority 2202 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=L2KO Group2=NA Group3=Unstranded view=JUNC