##================================================================== ## Beginning of track view of Dataset NOV0118 (mm10) ##------------------------------------------------------------------ ## mm10 NOV0118 Unstranded RNAseq track NOV0118L2hetfetaliv compositeTrack on shortLabel NOV0118L2hetfetaliv Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NOV0118L2hetfetaliv priority 3000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ WT=WT \ Het=Het subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0118L2hetfetalivView1 parent NOV0118L2hetfetaliv shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track WTxRep1_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep1_str1.bw shortLabel WTxRep1_str1.s0_coverage longLabel WTxRep1_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep2_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep2_str1.bw shortLabel WTxRep2_str1.s0_coverage longLabel WTxRep2_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep3_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep3_str1.bw shortLabel WTxRep3_str1.s0_coverage longLabel WTxRep3_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep4_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep4_str1.bw shortLabel WTxRep4_str1.s0_coverage longLabel WTxRep4_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep5_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep5_str1.bw shortLabel WTxRep5_str1.s0_coverage longLabel WTxRep5_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep6_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep6_str1.bw shortLabel WTxRep6_str1.s0_coverage longLabel WTxRep6_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track WTxRep7_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl WTxRep7_str1.bw shortLabel WTxRep7_str1.s0_coverage longLabel WTxRep7_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 3072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=WT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep1_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep1_str1.bw shortLabel HetxRep1_str1.s0_coverage longLabel HetxRep1_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep2_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep2_str1.bw shortLabel HetxRep2_str1.s0_coverage longLabel HetxRep2_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3092 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep3_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep3_str1.bw shortLabel HetxRep3_str1.s0_coverage longLabel HetxRep3_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep4_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep4_str1.bw shortLabel HetxRep4_str1.s0_coverage longLabel HetxRep4_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3112 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep5_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep5_str1.bw shortLabel HetxRep5_str1.s0_coverage longLabel HetxRep5_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3122 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep6_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep6_str1.bw shortLabel HetxRep6_str1.s0_coverage longLabel HetxRep6_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3132 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track HetxRep7_str1.s0_coverage parent NOV0118L2hetfetalivView1 on bigDataUrl HetxRep7_str1.bw shortLabel HetxRep7_str1.s0_coverage longLabel HetxRep7_str1.s0_coverage unstranded bw type bigWig color 125,0,153 priority 3142 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Het Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0118L2hetfetalivView2 parent NOV0118L2hetfetaliv shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track WTxRep1_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep1.bb shortLabel WTxRep1 junctions longLabel WTxRep1 junctions type bigBed 12 visibility pack priority 3152 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep2_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep2.bb shortLabel WTxRep2 junctions longLabel WTxRep2 junctions type bigBed 12 visibility pack priority 3162 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep3_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep3.bb shortLabel WTxRep3 junctions longLabel WTxRep3 junctions type bigBed 12 visibility pack priority 3172 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep4_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep4.bb shortLabel WTxRep4 junctions longLabel WTxRep4 junctions type bigBed 12 visibility pack priority 3182 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep5_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep5.bb shortLabel WTxRep5 junctions longLabel WTxRep5 junctions type bigBed 12 visibility pack priority 3192 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep6_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep6.bb shortLabel WTxRep6 junctions longLabel WTxRep6 junctions type bigBed 12 visibility pack priority 3202 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track WTxRep7_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl WTxRep7.bb shortLabel WTxRep7 junctions longLabel WTxRep7 junctions type bigBed 12 visibility pack priority 3212 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep1_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep1.bb shortLabel HetxRep1 junctions longLabel HetxRep1 junctions type bigBed 12 visibility pack priority 3222 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep2_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep2.bb shortLabel HetxRep2 junctions longLabel HetxRep2 junctions type bigBed 12 visibility pack priority 3232 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep3_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep3.bb shortLabel HetxRep3 junctions longLabel HetxRep3 junctions type bigBed 12 visibility pack priority 3242 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep4_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep4.bb shortLabel HetxRep4 junctions longLabel HetxRep4 junctions type bigBed 12 visibility pack priority 3252 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep5_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep5.bb shortLabel HetxRep5 junctions longLabel HetxRep5 junctions type bigBed 12 visibility pack priority 3262 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep6_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep6.bb shortLabel HetxRep6 junctions longLabel HetxRep6 junctions type bigBed 12 visibility pack priority 3272 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track HetxRep7_junctions parent NOV0118L2hetfetalivView2 on bigDataUrl HetxRep7.bb shortLabel HetxRep7 junctions longLabel HetxRep7 junctions type bigBed 12 visibility pack priority 3282 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Het Group2=NA Group3=Unstranded view=JUNC