##================================================================== ## Beginning of track view of Dataset NS50741 (erccCmASM9120v1) ##------------------------------------------------------------------ ## erccCmASM9120v1 NS50741 Unstranded RNAseq track NS50741KO compositeTrack on shortLabel NS50741KO Unstranded RNAseq longLabel erccCmASM9120v1 Unstranded RNAseq project NS50741KO priority 4160 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ CmWT=CmWT \ TTP=TTP subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NS50741KOView1 parent NS50741KO shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track CmWTx1_str1.s0_coverage parent NS50741KOView1 on bigDataUrl CmWTx1_str1.bw shortLabel CmWTx1_str1.s0_coverage longLabel CmWTx1_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4172 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=CmWT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track CmWTx2_str1.s0_coverage parent NS50741KOView1 on bigDataUrl CmWTx2_str1.bw shortLabel CmWTx2_str1.s0_coverage longLabel CmWTx2_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4182 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=CmWT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track CmWTx3_str1.s0_coverage parent NS50741KOView1 on bigDataUrl CmWTx3_str1.bw shortLabel CmWTx3_str1.s0_coverage longLabel CmWTx3_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4192 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=CmWT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track CmWTx4_str1.s0_coverage parent NS50741KOView1 on bigDataUrl CmWTx4_str1.bw shortLabel CmWTx4_str1.s0_coverage longLabel CmWTx4_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=CmWT Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TTP48x1_str1.s0_coverage parent NS50741KOView1 on bigDataUrl TTP48x1_str1.bw shortLabel TTP48x1_str1.s0_coverage longLabel TTP48x1_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=TTP Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TTP53x1_str1.s0_coverage parent NS50741KOView1 on bigDataUrl TTP53x1_str1.bw shortLabel TTP53x1_str1.s0_coverage longLabel TTP53x1_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4222 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=TTP Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TTP78x1_str1.s0_coverage parent NS50741KOView1 on bigDataUrl TTP78x1_str1.bw shortLabel TTP78x1_str1.s0_coverage longLabel TTP78x1_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4232 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=TTP Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TTP83x1_str1.s0_coverage parent NS50741KOView1 on bigDataUrl TTP83x1_str1.bw shortLabel TTP83x1_str1.s0_coverage longLabel TTP83x1_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4242 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=TTP Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NS50741KOView2 parent NS50741KO shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track CmWTx1_junctions parent NS50741KOView2 on bigDataUrl CmWTx1.bb shortLabel CmWTx1 junctions longLabel CmWTx1 junctions type bigBed 12 visibility pack priority 4252 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=CmWT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track CmWTx2_junctions parent NS50741KOView2 on bigDataUrl CmWTx2.bb shortLabel CmWTx2 junctions longLabel CmWTx2 junctions type bigBed 12 visibility pack priority 4262 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=CmWT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track CmWTx3_junctions parent NS50741KOView2 on bigDataUrl CmWTx3.bb shortLabel CmWTx3 junctions longLabel CmWTx3 junctions type bigBed 12 visibility pack priority 4272 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=CmWT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track CmWTx4_junctions parent NS50741KOView2 on bigDataUrl CmWTx4.bb shortLabel CmWTx4 junctions longLabel CmWTx4 junctions type bigBed 12 visibility pack priority 4282 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=CmWT Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TTP48x1_junctions parent NS50741KOView2 on bigDataUrl TTP48x1.bb shortLabel TTP48x1 junctions longLabel TTP48x1 junctions type bigBed 12 visibility pack priority 4292 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=TTP Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TTP53x1_junctions parent NS50741KOView2 on bigDataUrl TTP53x1.bb shortLabel TTP53x1 junctions longLabel TTP53x1 junctions type bigBed 12 visibility pack priority 4302 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=TTP Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TTP78x1_junctions parent NS50741KOView2 on bigDataUrl TTP78x1.bb shortLabel TTP78x1 junctions longLabel TTP78x1 junctions type bigBed 12 visibility pack priority 4312 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=TTP Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TTP83x1_junctions parent NS50741KOView2 on bigDataUrl TTP83x1.bb shortLabel TTP83x1 junctions longLabel TTP83x1 junctions type bigBed 12 visibility pack priority 4322 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=TTP Group2=NA Group3=Unstranded view=JUNC ##-------- ## Beginning of gene track view track Annotation bigDataUrl genome.bb shortLabel C.merolae GTF longLabel C.merolae GTF with type bigBed type bigBed 12 visibility full searchIndex name