track dataRNA1 compositeTrack on shortLabel RNAseq 786-O Sept2023 longLabel RNAseq Normalized Depth Tracks - 786-O Sept2023 priority 100 subGroup1 view View RNA=RNA subGroup2 cond Condition EV=EV GLIS3=GLIS3 subGroup3 rep Replicate 1=1 2=2 3=3 subGroup4 str Strand plus=plus minus=minus dimensions dimX=cond dimY=rep dimA=str sortOrder view=+ cond=+ rep=+ str=+ configurable on type bigWig track dataRNA1_ViewDepth parent dataRNA1 shortLabel RNAseq 786-O Sept2023 longLabel RNAseq Normalized Depth Tracks - 786-O Sept2023 view RNA visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 autoScale group showSubtrackColorOnUi on viewUi on track 786O-EV-rep1.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep1.depthRPM.plus.bw shortLabel 786O-EV-rep1 (plus) longLabel 786-O EV rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 101 visibility hide subGroups view=RNA cond=EV rep=1 str=plus track 786O-EV-rep1.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep1.depthRPM.minus.bw shortLabel 786O-EV-rep1 (minus) longLabel 786-O EV rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 102 visibility hide subGroups view=RNA cond=EV rep=1 str=minus track 786O-EV-rep2.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep2.depthRPM.plus.bw shortLabel 786O-EV-rep2 (plus) longLabel 786-O EV rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 103 visibility hide subGroups view=RNA cond=EV rep=2 str=plus track 786O-EV-rep2.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep2.depthRPM.minus.bw shortLabel 786O-EV-rep2 (minus) longLabel 786-O EV rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 104 visibility hide subGroups view=RNA cond=EV rep=2 str=minus track 786O-EV-rep3.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep3.depthRPM.plus.bw shortLabel 786O-EV-rep3 (plus) longLabel 786-O EV rep3 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 105 visibility hide subGroups view=RNA cond=EV rep=3 str=plus track 786O-EV-rep3.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-EV-rep3.depthRPM.minus.bw shortLabel 786O-EV-rep3 (minus) longLabel 786-O EV rep3 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 106 visibility hide subGroups view=RNA cond=EV rep=3 str=minus track 786O-GLIS3-rep1.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep1.depthRPM.plus.bw shortLabel 786O-GLIS3-rep1 (plus) longLabel 786-O GLIS3 rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 107 visibility hide subGroups view=RNA cond=GLIS3 rep=1 str=plus track 786O-GLIS3-rep1.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep1.depthRPM.minus.bw shortLabel 786O-GLIS3-rep1 (minus) longLabel 786-O GLIS3 rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 108 visibility hide subGroups view=RNA cond=GLIS3 rep=1 str=minus track 786O-GLIS3-rep2.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep2.depthRPM.plus.bw shortLabel 786O-GLIS3-rep2 (plus) longLabel 786-O GLIS3 rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 109 visibility hide subGroups view=RNA cond=GLIS3 rep=2 str=plus track 786O-GLIS3-rep2.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep2.depthRPM.minus.bw shortLabel 786O-GLIS3-rep2 (minus) longLabel 786-O GLIS3 rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 110 visibility hide subGroups view=RNA cond=GLIS3 rep=2 str=minus track 786O-GLIS3-rep3.P parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep3.depthRPM.plus.bw shortLabel 786O-GLIS3-rep3 (plus) longLabel 786-O GLIS3 rep3 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 111 visibility hide subGroups view=RNA cond=GLIS3 rep=3 str=plus track 786O-GLIS3-rep3.M parent dataRNA1_ViewDepth bigDataUrl data/786O_NS51433/786O-GLIS3-rep3.depthRPM.minus.bw shortLabel 786O-GLIS3-rep3 (minus) longLabel 786-O GLIS3 rep3 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 112 visibility hide subGroups view=RNA cond=GLIS3 rep=3 str=minus track dataRNA2 compositeTrack on shortLabel RNAseq hES_astro Jan2024 longLabel RNAseq Normalized Depth Tracks - hES astroctye G3KO Jan2024 priority 120 subGroup1 view View RNA=RNA subGroup2 gt Genotype G3KO=G3KO WT=WT subGroup3 rep Replicate 1=1 2=2 3=3 dimensions dimX=gt dimY=rep sortOrder view=+ gt=+ rep=+ configurable on type bigWig track dataRNA2_ViewDepth parent dataRNA2 shortLabel RNAseq hES_astro Jan2024 longLabel RNAseq Normalized Depth Tracks - hES astroctye G3KO Jan2024 view RNA visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 autoScale group showSubtrackColorOnUi on viewUi on track hES_astro-G3KO-rep1 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-G3KO-rep1.depthRPM.bw shortLabel hES_astro-G3KO-rep1 longLabel hES_astro G3KO rep1 RPM-normalized depth type bigWig color 0,0,0 priority 121 visibility hide subGroups view=RNA gt=G3KO rep=1 track hES_astro-G3KO-rep2 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-G3KO-rep2.depthRPM.bw shortLabel hES_astro-G3KO-rep2 longLabel hES_astro G3KO rep2 RPM-normalized depth type bigWig color 0,0,0 priority 122 visibility hide subGroups view=RNA gt=G3KO rep=2 track hES_astro-G3KO-rep3 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-G3KO-rep3.depthRPM.bw shortLabel hES_astro-G3KO-rep3 longLabel hES_astro G3KO rep3 RPM-normalized depth type bigWig color 0,0,0 priority 123 visibility hide subGroups view=RNA gt=G3KO rep=3 track hES_astro-WT-rep1 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-WT-rep1.depthRPM.bw shortLabel hES_astro-WT-rep1 longLabel hES_astro WT rep1 RPM-normalized depth type bigWig color 0,0,0 priority 124 visibility hide subGroups view=RNA gt=WT rep=1 track hES_astro-WT-rep2 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-WT-rep2.depthRPM.bw shortLabel hES_astro-WT-rep2 longLabel hES_astro WT rep2 RPM-normalized depth type bigWig color 0,0,0 priority 125 visibility hide subGroups view=RNA gt=WT rep=2 track hES_astro-WT-rep3 parent dataRNA2_ViewDepth bigDataUrl data/hES_astro_NS51454/hES_astro-WT-rep3.depthRPM.bw shortLabel hES_astro-WT-rep3 longLabel hES_astro WT rep3 RPM-normalized depth type bigWig color 0,0,0 priority 126 visibility hide subGroups view=RNA gt=WT rep=3 track dataRNA3 compositeTrack on shortLabel RNAseq NPC May2024 longLabel RNAseq Normalized Depth Tracks - NPC May2024 priority 130 subGroup1 view View RNA=RNA subGroup2 gt Genotype NPC_G3KO=NPC_G3KO NPC_WT=NPC_WT subGroup3 rep Replicate 1=1 2=2 3=3 subGroup4 str Strand plus=plus minus=minus dimensions dimX=gt dimY=rep dimA=str sortOrder view=+ gt=+ rep=+ str=+ configurable on type bigWig track dataRNA3_ViewDepth parent dataRNA3 shortLabel RNAseq NPC May2024 longLabel RNAseq Normalized Depth Tracks - NPC May2024 view RNA visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 autoScale group showSubtrackColorOnUi on viewUi on track NPC_G3KO-rep1.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep1.depthRPM.plus.bw shortLabel NPC_G3KO-rep1 (plus) longLabel NPC_G3KO rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 131 visibility hide subGroups view=RNA gt=NPC_G3KO rep=1 str=plus track NPC_G3KO-rep1.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep1.depthRPM.minus.bw shortLabel NPC_G3KO-rep1 (minus) longLabel NPC_G3KO rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 132 visibility hide subGroups view=RNA gt=NPC_G3KO rep=1 str=minus track NPC_G3KO-rep2.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep2.depthRPM.plus.bw shortLabel NPC_G3KO-rep2 (plus) longLabel NPC_G3KO rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 133 visibility hide subGroups view=RNA gt=NPC_G3KO rep=2 str=plus track NPC_G3KO-rep2.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep2.depthRPM.minus.bw shortLabel NPC_G3KO-rep2 (minus) longLabel NPC_G3KO rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 134 visibility hide subGroups view=RNA gt=NPC_G3KO rep=2 str=minus track NPC_G3KO-rep3.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep3.depthRPM.plus.bw shortLabel NPC_G3KO-rep3 (plus) longLabel NPC_G3KO rep3 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 135 visibility hide subGroups view=RNA gt=NPC_G3KO rep=3 str=plus track NPC_G3KO-rep3.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_G3KO-rep3.depthRPM.minus.bw shortLabel NPC_G3KO-rep3 (minus) longLabel NPC_G3KO rep3 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 136 visibility hide subGroups view=RNA gt=NPC_G3KO rep=3 str=minus track NPC_WT-rep1.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep1.depthRPM.plus.bw shortLabel NPC_WT-rep1 (plus) longLabel NPC_WT rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 137 visibility hide subGroups view=RNA gt=NPC_WT rep=1 str=plus track NPC_WT-rep1.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep1.depthRPM.minus.bw shortLabel NPC_WT-rep1 (minus) longLabel NPC_WT rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 138 visibility hide subGroups view=RNA gt=NPC_WT rep=1 str=minus track NPC_WT-rep2.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep2.depthRPM.plus.bw shortLabel NPC_WT-rep2 (plus) longLabel NPC_WT rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 139 visibility hide subGroups view=RNA gt=NPC_WT rep=2 str=plus track NPC_WT-rep2.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep2.depthRPM.minus.bw shortLabel NPC_WT-rep2 (minus) longLabel NPC_WT rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 140 visibility hide subGroups view=RNA gt=NPC_WT rep=2 str=minus track NPC_WT-rep3.P parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep3.depthRPM.plus.bw shortLabel NPC_WT-rep3 (plus) longLabel NPC_WT rep3 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 141 visibility hide subGroups view=RNA gt=NPC_WT rep=3 str=plus track NPC_WT-rep3.M parent dataRNA3_ViewDepth bigDataUrl data/NPC_NS51503/NPC_WT-rep3.depthRPM.minus.bw shortLabel NPC_WT-rep3 (minus) longLabel NPC_WT rep3 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 142 visibility hide subGroups view=RNA gt=NPC_WT rep=3 str=minus track dataRNA4 compositeTrack on shortLabel RNAseq hESC Dec2024 longLabel RNAseq Normalized Depth Tracks - hESC Dec2024 priority 150 subGroup1 view View RNA=RNA subGroup2 gt Genotype hESC-WT=hESC-WT hESC-C8KO=hESC-C8KO hESC-C20KO=hESC-C20KO subGroup3 rep Replicate 1=1 2=2 subGroup4 str Strand plus=plus minus=minus dimensions dimX=gt dimY=rep dimA=str sortOrder view=+ gt=+ rep=+ str=+ configurable on type bigWig track dataRNA4_ViewDepth parent dataRNA4 shortLabel RNAseq hESC Dec2024 longLabel RNAseq Normalized Depth Tracks - hESC Dec2024 view RNA visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 autoScale group showSubtrackColorOnUi on viewUi on track hESC-WT-rep1.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-WT-rep1.depthRPM.plus.bw shortLabel hESC-WT-rep1 (plus) longLabel hESC-WT rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 151 visibility hide subGroups view=RNA gt=hESC-WT rep=1 str=plus track hESC-WT-rep1.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-WT-rep1.depthRPM.minus.bw shortLabel hESC-WT-rep1 (minus) longLabel hESC-WT rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 152 visibility hide subGroups view=RNA gt=hESC-WT rep=1 str=minus track hESC-WT-rep2.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-WT-rep2.depthRPM.plus.bw shortLabel hESC-WT-rep2 (plus) longLabel hESC-WT rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 153 visibility hide subGroups view=RNA gt=hESC-WT rep=2 str=plus track hESC-WT-rep2.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-WT-rep2.depthRPM.minus.bw shortLabel hESC-WT-rep2 (minus) longLabel hESC-WT rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 154 visibility hide subGroups view=RNA gt=hESC-WT rep=2 str=minus track hESC-C8KO-rep1.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C8KO-rep1.depthRPM.plus.bw shortLabel hESC-C8KO-rep1 (plus) longLabel hESC-C8KO rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 155 visibility hide subGroups view=RNA gt=hESC-C8KO rep=1 str=plus track hESC-C8KO-rep1.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C8KO-rep1.depthRPM.minus.bw shortLabel hESC-C8KO-rep1 (minus) longLabel hESC-C8KO rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 156 visibility hide subGroups view=RNA gt=hESC-C8KO rep=1 str=minus track hESC-C8KO-rep2.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C8KO-rep2.depthRPM.plus.bw shortLabel hESC-C8KO-rep2 (plus) longLabel hESC-C8KO rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 157 visibility hide subGroups view=RNA gt=hESC-C8KO rep=2 str=plus track hESC-C8KO-rep2.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C8KO-rep2.depthRPM.minus.bw shortLabel hESC-C8KO-rep2 (minus) longLabel hESC-C8KO rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 158 visibility hide subGroups view=RNA gt=hESC-C8KO rep=2 str=minus track hESC-C20KO-rep1.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C20KO-rep1.depthRPM.plus.bw shortLabel hESC-C20KO-rep1 (plus) longLabel hESC-C20KO rep1 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 159 visibility hide subGroups view=RNA gt=hESC-C20KO rep=1 str=plus track hESC-C20KO-rep1.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C20KO-rep1.depthRPM.minus.bw shortLabel hESC-C20KO-rep1 (minus) longLabel hESC-C20KO rep1 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 160 visibility hide subGroups view=RNA gt=hESC-C20KO rep=1 str=minus track hESC-C20KO-rep2.P parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C20KO-rep2.depthRPM.plus.bw shortLabel hESC-C20KO-rep2 (plus) longLabel hESC-C20KO rep2 RPM-normalized depth (plus) type bigWig color 0,0,0 priority 161 visibility hide subGroups view=RNA gt=hESC-C20KO rep=2 str=plus track hESC-C20KO-rep2.M parent dataRNA4_ViewDepth bigDataUrl data/hESC_NOV0676/hESC-C20KO-rep2.depthRPM.minus.bw shortLabel hESC-C20KO-rep2 (minus) longLabel hESC-C20KO rep2 RPM-normalized depth (minus) type bigWig color 0,0,0 priority 162 visibility hide subGroups view=RNA gt=hESC-C20KO rep=2 str=minus track dataPBLC superTrack on show shortLabel public ChIP longLabel public ChIPseq priority 900 configurable on viewUi on track 786O_HIF1a_reExpr_Input.D parent dataPBLC bigDataUrl data/public_ChIP/GSE67237_HIF1a/786O_HIF1a_reExpr_Input.bwt2.hg38.MAPQ5-PP.rmdup.singlefragAll.norm10M.bigWig shortLabel 786O_HIF1a_reExpr_Input longLabel 786O_HIF1a_reExpr_Input normalized depth type bigWig alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 viewLimits 0:30 color 0,0,0 priority 901 visibility hide track 786O_HIF1a_reExpr_IP.D parent dataPBLC bigDataUrl data/public_ChIP/GSE67237_HIF1a/786O_HIF1a_reExpr_IP.bwt2.hg38.MAPQ5-PP.rmdup.singlefragAll.norm10M.bigWig shortLabel 786O_HIF1a_reExpr_IP longLabel 786O_HIF1a_reExpr_IP normalized depth type bigWig alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 viewLimits 0:30 color 0,0,0 priority 902 visibility hide track 786O_HIF1a_reExpr_IP.P parent dataPBLC bigDataUrl data/public_ChIP/GSE67237_HIF1a/786O_HIF1a_reExpr_IP.homer-peakcalls.fdr_e-3.ExclBlklist.300bp.bigBed shortLabel 786O_HIF1a_reExpr_IP peaks longLabel 786O_HIF1a_reExpr_IP peaks type bigBed 3 color 0,0,0 priority 903 visibility dense showSubtrackColorOnUi on