wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K4me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K4me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.Mll2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.Mll2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.HA-CRM1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.HA-CRM1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.IgG-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.IgG-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K4me3_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K4me3_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.IgG-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.IgG-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K4me3-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K4me3-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K4me3-IH_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K4me3-IH_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.Mll1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.Mll1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.CRM1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.CRM1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K27me3_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K27me3_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K27me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K27me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &
wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K27me3-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K27me3-1_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq-smoothed-summary.graph.variableStep.bw &

wigToBigWig /ddn/gs1/home/jothi/Analysis/mm9/Siladi/Cut-and-Run/NS51546.H3K4me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq.bedGraph /ddn/gs1/group/jothi/jothidata/UCSC/Data/mm9/chrom.sizes NS51546.H3K4me3-2_20241112_132911.L001.paired.bowtie2.mapq30.bam.bedpe.uniq.bedGraph.bw &