track SH_hmod_tracks compositeTrack on shortLabel SH Tracks longLabel Sylvia's Depth & Peaks priority 100 visibility full subGroup1 view Views COV=depth PK=peaks SE=superenhancers subGroup2 chiptype ChIP ERa=ERa H3K27Ac=H3K27Ac H3K4me1=H3K4me1 H3K4me3=H3K4me3 Pol2=Pol2 input=input subGroup3 condition Condition JV=21d_Veh JE=21d_E2 AV=adult_Veh AE=adult_E2 other=other subGroup4 ERa ERa orig=ERa_HOMER resize=ERa_HOMER_200nt dimensions dimX=chiptype dimY=condition dimA=ERa sortOrder chiptype=+ condition=+ view=- configurable on type bed 3 track SH_hmod_tracksViewDepth parent SH_hmod_tracks shortLabel Depth longLabel Normalized ChIP-seq Depth view COV visibility hide type bigWig allButtonPair on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 150:40:11 viewLimits 0:50 showSubtrackColorOnUi on viewUi on track 21d_Veh_ERa.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_Veh_ERa.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_Veh_ERa depth longLabel normalized read depth: 21d_Veh_ERa type bigWig color 204,0,0 priority 101 visibility hide subGroups chiptype=ERa condition=JV view=COV track 21d_E2_ERa.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_E2_ERa.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_E2_ERa depth longLabel normalized read depth: 21d_E2_ERa type bigWig color 204,0,0 priority 102 visibility hide subGroups chiptype=ERa condition=JE view=COV track adult_Veh_ERa.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_Veh_ERa.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_Veh_ERa depth longLabel normalized read depth: adult_Veh_ERa type bigWig color 204,0,0 priority 103 visibility hide subGroups chiptype=ERa condition=AV view=COV track adult_E2_ERa.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_E2_ERa.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_E2_ERa depth longLabel normalized read depth: adult_E2_ERa type bigWig color 204,0,0 priority 104 visibility hide subGroups chiptype=ERa condition=AE view=COV track 21d_Veh_H3K27Ac.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_Veh_H3K27Ac.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_Veh_H3K27Ac depth longLabel normalized read depth: 21d_Veh_H3K27Ac type bigWig color 0,153,0 priority 105 visibility hide subGroups chiptype=H3K27Ac condition=JV view=COV track 21d_E2_H3K27Ac.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_E2_H3K27Ac.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_E2_H3K27Ac depth longLabel normalized read depth: 21d_E2_H3K27Ac type bigWig color 0,153,0 priority 106 visibility hide subGroups chiptype=H3K27Ac condition=JE view=COV track adult_Veh_H3K27Ac.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_Veh_H3K27Ac.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_Veh_H3K27Ac depth longLabel normalized read depth: adult_Veh_H3K27Ac type bigWig color 0,153,0 priority 107 visibility hide subGroups chiptype=H3K27Ac condition=AV view=COV track adult_E2_H3K27Ac.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_E2_H3K27Ac.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_E2_H3K27Ac depth longLabel normalized read depth: adult_E2_H3K27Ac type bigWig color 0,153,0 priority 108 visibility hide subGroups chiptype=H3K27Ac condition=AE view=COV track 21d_Veh_H3K4me1.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_Veh_H3K4me1.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_Veh_H3K4me1 depth longLabel normalized read depth: 21d_Veh_H3K4me1 type bigWig color 0,0,255 priority 109 visibility hide subGroups chiptype=H3K4me1 condition=JV view=COV track 21d_E2_H3K4me1.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_E2_H3K4me1.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_E2_H3K4me1 depth longLabel normalized read depth: 21d_E2_H3K4me1 type bigWig color 0,0,255 priority 110 visibility hide subGroups chiptype=H3K4me1 condition=JE view=COV track adult_Veh_H3K4me1.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_Veh_H3K4me1.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_Veh_H3K4me1 depth longLabel normalized read depth: adult_Veh_H3K4me1 type bigWig color 0,0,255 priority 111 visibility hide subGroups chiptype=H3K4me1 condition=AV view=COV track adult_E2_H3K4me1.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_E2_H3K4me1.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_E2_H3K4me1 depth longLabel normalized read depth: adult_E2_H3K4me1 type bigWig color 0,0,255 priority 112 visibility hide subGroups chiptype=H3K4me1 condition=AE view=COV track 21d_Veh_H3K4me3.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_Veh_H3K4me3.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_Veh_H3K4me3 depth longLabel normalized read depth: 21d_Veh_H3K4me3 type bigWig color 127,0,255 priority 113 visibility hide subGroups chiptype=H3K4me3 condition=JV view=COV track 21d_E2_H3K4me3.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_E2_H3K4me3.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_E2_H3K4me3 depth longLabel normalized read depth: 21d_E2_H3K4me3 type bigWig color 127,0,255 priority 114 visibility hide subGroups chiptype=H3K4me3 condition=JE view=COV track adult_Veh_H3K4me3.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_Veh_H3K4me3.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_Veh_H3K4me3 depth longLabel normalized read depth: adult_Veh_H3K4me3 type bigWig color 127,0,255 priority 115 visibility hide subGroups chiptype=H3K4me3 condition=AV view=COV track adult_E2_H3K4me3.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_E2_H3K4me3.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_E2_H3K4me3 depth longLabel normalized read depth: adult_E2_H3K4me3 type bigWig color 127,0,255 priority 116 visibility hide subGroups chiptype=H3K4me3 condition=AE view=COV track adult_Veh_Pol2.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_Veh_Pol2.bwt.rmdup.ext150.norm15M.bigWig shortLabel adult_Veh_Pol2 depth longLabel normalized read depth: adult_Veh_Pol2 type bigWig color 255,128,0 priority 117 visibility hide subGroups chiptype=Pol2 condition=AV view=COV track adult_E2_Pol2.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_E2_Pol2.bwt.rmdup.ext150.norm15M.bigWig shortLabel adult_E2_Pol2 depth longLabel normalized read depth: adult_E2_Pol2 type bigWig color 255,128,0 priority 118 visibility hide subGroups chiptype=Pol2 condition=AE view=COV track 21d_input.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/21d_input.bwt.rmdup.ext200.norm20M.bigWig shortLabel 21d_input depth longLabel normalized read depth: 21d_input type bigWig color 204,204,204 priority 119 visibility hide subGroups chiptype=input condition=other view=COV track adult_input.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/adult_input.bwt.rmdup.ext200.norm20M.bigWig shortLabel adult_input depth longLabel normalized read depth: adult_input type bigWig color 204,204,204 priority 120 visibility hide subGroups chiptype=input condition=other view=COV track orig_input.D parent SH_hmod_tracksViewDepth on bigDataUrl DATA/orig_input.bwt.rmdup.ext200.norm20M.bigWig shortLabel orig_input depth longLabel normalized read depth: orig_input type bigWig color 204,204,204 priority 121 visibility hide subGroups chiptype=input condition=other view=COV track SH_hmod_tracksViewPeaks parent SH_hmod_tracks shortLabel Peaks longLabel Peaks, ChIP-seq view PK visibility dense type bigBed 3 allButtonPair on dragAndDrop on showSubtrackColorOnUi on viewUi on track 21d_Veh_ERa.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_Veh_ERa.homer-peakcalls.factor_F8_e-5.bigBed shortLabel 21d_Veh_ERa peaks longLabel 21d_Veh_ERa peaks type bigBed 3 color 204,0,0 priority 122 visibility dense subGroups chiptype=ERa condition=JV ERa=orig view=PK track 21d_Veh_ERa.P€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_Veh_ERa.homer-peakcalls.factor_F8_e-5.200nt.bigBed shortLabel 21d_Veh_ERa 200nt peaks longLabel 21d_Veh_ERa 200nt peaks type bigBed 3 color 204,0,0 priority 123 visibility dense subGroups chiptype=ERa condition=JV ERa=resize view=PK track 21d_E2_ERa.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_E2_ERa.homer-peakcalls.factor_F8_e-5.bigBed shortLabel 21d_E2_ERa peaks longLabel 21d_E2_ERa peaks type bigBed 3 color 204,0,0 priority 124 visibility dense subGroups chiptype=ERa condition=JE ERa=orig view=PK track 21d_E2_ERa.P€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_E2_ERa.homer-peakcalls.factor_F8_e-5.200nt.bigBed shortLabel 21d_E2_ERa 200nt peaks longLabel 21d_E2_ERa 200nt peaks type bigBed 3 color 204,0,0 priority 125 visibility dense subGroups chiptype=ERa condition=JE ERa=resize view=PK track adult_Veh_ERa.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_ERa.homer-peakcalls.factor_F8_e-5.adultInput.bigBed shortLabel adult_Veh_ERa-newI peaks longLabel adult_Veh_ERa-newI peaks type bigBed 3 color 204,0,0 priority 126 visibility dense subGroups chiptype=ERa condition=AV ERa=orig view=PK track adult_Veh_ERa.P€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_ERa.homer-peakcalls.factor_F8_e-5.adultInput.200nt.bigBed shortLabel adult_Veh_ERa-newI 200nt peaks longLabel adult_Veh_ERa-newI 200nt peaks type bigBed 3 color 204,0,0 priority 127 visibility dense subGroups chiptype=ERa condition=AV ERa=resize view=PK track adult_Veh_ERa.PX parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_ERa.homer-peakcalls.factor_F8_e-5.origInput.bigBed shortLabel adult_Veh_ERa-oldI peaks longLabel adult_Veh_ERa-oldI peaks type bigBed 3 color 204,0,0 priority 128 visibility dense subGroups chiptype=ERa condition=AV ERa=orig view=PK track adult_Veh_ERa.PX€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_ERa.homer-peakcalls.factor_F8_e-5.origInput.200nt.bigBed shortLabel adult_Veh_ERa-oldI 200nt peaks longLabel adult_Veh_ERa-oldI 200nt peaks type bigBed 3 color 204,0,0 priority 129 visibility dense subGroups chiptype=ERa condition=AV ERa=resize view=PK track adult_E2_ERa.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_ERa.homer-peakcalls.factor_F8_e-5.adultInput.bigBed shortLabel adult_E2_ERa-newI peaks longLabel adult_E2_ERa-newI peaks type bigBed 3 color 204,0,0 priority 130 visibility dense subGroups chiptype=ERa condition=AE ERa=orig view=PK track adult_E2_ERa.P€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_ERa.homer-peakcalls.factor_F8_e-5.adultInput.200nt.bigBed shortLabel adult_E2_ERa-newI 200nt peaks longLabel adult_E2_ERa-newI 200nt peaks type bigBed 3 color 204,0,0 priority 131 visibility dense subGroups chiptype=ERa condition=AE ERa=resize view=PK track adult_E2_ERa.PX parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_ERa.homer-peakcalls.factor_F8_e-5.origInput.bigBed shortLabel adult_E2_ERa-oldI peaks longLabel adult_E2_ERa-oldI peaks type bigBed 3 color 204,0,0 priority 132 visibility dense subGroups chiptype=ERa condition=AE ERa=orig view=PK track adult_E2_ERa.PX€ parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_ERa.homer-peakcalls.factor_F8_e-5.origInput.200nt.bigBed shortLabel adult_E2_ERa-oldI 200nt peaks longLabel adult_E2_ERa-oldI 200nt peaks type bigBed 3 color 204,0,0 priority 133 visibility dense subGroups chiptype=ERa condition=AE ERa=resize view=PK track 21d_Veh_H3K27Ac.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_Veh_H3K27Ac.ActiveMotif_peaks.bigBed shortLabel 21d_Veh_H3K27Ac peaks longLabel 21d_Veh_H3K27Ac peaks type bigBed 3 color 0,153,0 priority 134 visibility dense subGroups chiptype=H3K27Ac condition=JV view=PK track 21d_E2_H3K27Ac.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_E2_H3K27Ac.ActiveMotif_peaks.bigBed shortLabel 21d_E2_H3K27Ac peaks longLabel 21d_E2_H3K27Ac peaks type bigBed 3 color 0,153,0 priority 135 visibility dense subGroups chiptype=H3K27Ac condition=JE view=PK track adult_Veh_H3K27Ac.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_H3K27Ac.ActiveMotif_peaks.bigBed shortLabel adult_Veh_H3K27Ac peaks longLabel adult_Veh_H3K27Ac peaks type bigBed 3 color 0,153,0 priority 136 visibility dense subGroups chiptype=H3K27Ac condition=AV view=PK track adult_E2_H3K27Ac.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_H3K27Ac.ActiveMotif_peaks.bigBed shortLabel adult_E2_H3K27Ac peaks longLabel adult_E2_H3K27Ac peaks type bigBed 3 color 0,153,0 priority 137 visibility dense subGroups chiptype=H3K27Ac condition=AE view=PK track 21d_Veh_H3K4me1.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_Veh_H3K4me1.ActiveMotif_peaks.bigBed shortLabel 21d_Veh_H3K4me1 peaks longLabel 21d_Veh_H3K4me1 peaks type bigBed 3 color 0,0,255 priority 138 visibility dense subGroups chiptype=H3K4me1 condition=JV view=PK track 21d_E2_H3K4me1.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_E2_H3K4me1.ActiveMotif_peaks.bigBed shortLabel 21d_E2_H3K4me1 peaks longLabel 21d_E2_H3K4me1 peaks type bigBed 3 color 0,0,255 priority 139 visibility dense subGroups chiptype=H3K4me1 condition=JE view=PK track adult_Veh_H3K4me1.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_H3K4me1.ActiveMotif_peaks.bigBed shortLabel adult_Veh_H3K4me1 peaks longLabel adult_Veh_H3K4me1 peaks type bigBed 3 color 0,0,255 priority 140 visibility dense subGroups chiptype=H3K4me1 condition=AV view=PK track adult_E2_H3K4me1.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_H3K4me1.ActiveMotif_peaks.bigBed shortLabel adult_E2_H3K4me1 peaks longLabel adult_E2_H3K4me1 peaks type bigBed 3 color 0,0,255 priority 141 visibility dense subGroups chiptype=H3K4me1 condition=AE view=PK track 21d_Veh_H3K4me3.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_Veh_H3K4me3.ActiveMotif_peaks.bigBed shortLabel 21d_Veh_H3K4me3 peaks longLabel 21d_Veh_H3K4me3 peaks type bigBed 3 color 127,0,255 priority 142 visibility dense subGroups chiptype=H3K4me3 condition=JV view=PK track 21d_E2_H3K4me3.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/21d_E2_H3K4me3.ActiveMotif_peaks.bigBed shortLabel 21d_E2_H3K4me3 peaks longLabel 21d_E2_H3K4me3 peaks type bigBed 3 color 127,0,255 priority 143 visibility dense subGroups chiptype=H3K4me3 condition=JE view=PK track adult_Veh_H3K4me3.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_Veh_H3K4me3.ActiveMotif_peaks.bigBed shortLabel adult_Veh_H3K4me3 peaks longLabel adult_Veh_H3K4me3 peaks type bigBed 3 color 127,0,255 priority 144 visibility dense subGroups chiptype=H3K4me3 condition=AV view=PK track adult_E2_H3K4me3.P parent SH_hmod_tracksViewPeaks on bigDataUrl DATA/adult_E2_H3K4me3.ActiveMotif_peaks.bigBed shortLabel adult_E2_H3K4me3 peaks longLabel adult_E2_H3K4me3 peaks type bigBed 3 color 127,0,255 priority 145 visibility dense subGroups chiptype=H3K4me3 condition=AE view=PK track SH_hmod_tracksViewSE parent SH_hmod_tracks shortLabel Superenhancers longLabel Superenhancers, ChIP-seq view SE visibility dense type bigBed 3 allButtonPair on dragAndDrop on showSubtrackColorOnUi on viewUi on track 21d_Veh_H3K27Ac.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/21d_Veh_H3K27Ac.ActiveMotif_SE.bigBed shortLabel 21d_Veh_H3K27Ac SE longLabel 21d_Veh_H3K27Ac SE type bigBed 3 color 0,153,0 priority 146 visibility dense subGroups chiptype=H3K27Ac condition=JV view=SE track 21d_E2_H3K27Ac.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/21d_E2_H3K27Ac.ActiveMotif_SE.bigBed shortLabel 21d_E2_H3K27Ac SE longLabel 21d_E2_H3K27Ac SE type bigBed 3 color 0,153,0 priority 147 visibility dense subGroups chiptype=H3K27Ac condition=JE view=SE track adult_Veh_H3K27Ac.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/adult_Veh_H3K27Ac.ActiveMotif_SE.bigBed shortLabel adult_Veh_H3K27Ac SE longLabel adult_Veh_H3K27Ac SE type bigBed 3 color 0,153,0 priority 148 visibility dense subGroups chiptype=H3K27Ac condition=AV view=SE track adult_E2_H3K27Ac.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/adult_E2_H3K27Ac.ActiveMotif_SE.bigBed shortLabel adult_E2_H3K27Ac SE longLabel adult_E2_H3K27Ac SE type bigBed 3 color 0,153,0 priority 149 visibility dense subGroups chiptype=H3K27Ac condition=AE view=SE track H3K27Ac.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/H3K27Ac.ActiveMotif_SE.bigBed shortLabel H3K27Ac merged SE longLabel H3K27Ac merged SE type bigBed 3 color 0,153,0 priority 150 visibility dense subGroups chiptype=H3K27Ac condition=other view=SE track 21d_Veh_H3K4me1.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/21d_Veh_H3K4me1.ActiveMotif_SE.bigBed shortLabel 21d_Veh_H3K4me1 SE longLabel 21d_Veh_H3K4me1 SE type bigBed 3 color 0,0,255 priority 151 visibility dense subGroups chiptype=H3K4me1 condition=JV view=SE track 21d_E2_H3K4me1.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/21d_E2_H3K4me1.ActiveMotif_SE.bigBed shortLabel 21d_E2_H3K4me1 SE longLabel 21d_E2_H3K4me1 SE type bigBed 3 color 0,0,255 priority 152 visibility dense subGroups chiptype=H3K4me1 condition=JE view=SE track adult_Veh_H3K4me1.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/adult_Veh_H3K4me1.ActiveMotif_SE.bigBed shortLabel adult_Veh_H3K4me1 SE longLabel adult_Veh_H3K4me1 SE type bigBed 3 color 0,0,255 priority 153 visibility dense subGroups chiptype=H3K4me1 condition=AV view=SE track adult_E2_H3K4me1.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/adult_E2_H3K4me1.ActiveMotif_SE.bigBed shortLabel adult_E2_H3K4me1 SE longLabel adult_E2_H3K4me1 SE type bigBed 3 color 0,0,255 priority 154 visibility dense subGroups chiptype=H3K4me1 condition=AE view=SE track H3K4me1.SE parent SH_hmod_tracksViewSE on bigDataUrl DATA/H3K4me1.ActiveMotif_SE.bigBed shortLabel H3K4me1 merged SE longLabel H3K4me1 merged SE type bigBed 3 color 0,0,255 priority 155 visibility dense subGroups chiptype=H3K4me1 condition=other view=SE