## Beginning of track view track NG138Zfp36L1KOLiver compositeTrack on shortLabel NG138 Zfp36L1KO Liver longLabel NG138 Zfp36L1KO Liver priority 2200 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ WT=WT \ Zfp36L1KO=Zfp36L1KO subGroup3 Group2 Group2 \ Liver=Liver dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track NG138Zfp36L1KOLiverView1 parent NG138Zfp36L1KOLiver shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track ES836_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES836_1.sickle.merged.topHat2pe_mm10.bw shortLabel WT_Liver ES836 coverage longLabel WT_Liver ES836 coverage type bigWig color 147,37,37 priority 2202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT Group2=Liver view=COV ## Coverage track track ES837_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES837_1.sickle.merged.topHat2pe_mm10.bw shortLabel WT_Liver ES837 coverage longLabel WT_Liver ES837 coverage type bigWig color 147,37,37 priority 2204 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT Group2=Liver view=COV ## Coverage track track ES838_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES838_1.sickle.merged.topHat2pe_mm10.bw shortLabel WT_Liver ES838 coverage longLabel WT_Liver ES838 coverage type bigWig color 147,37,37 priority 2206 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT Group2=Liver view=COV ## Coverage track track ES839_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES839_1.sickle.merged.topHat2pe_mm10.bw shortLabel WT_Liver ES839 coverage longLabel WT_Liver ES839 coverage type bigWig color 147,37,37 priority 2208 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT Group2=Liver view=COV ## Coverage track track ES840_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES840_1.sickle.merged.topHat2pe_mm10.bw shortLabel Zfp36L1KO_Liver ES840 coverage longLabel Zfp36L1KO_Liver ES840 coverage type bigWig color 170,122,0 priority 2210 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Zfp36L1KO Group2=Liver view=COV ## Coverage track track ES841_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES841_1.sickle.merged.topHat2pe_mm10.bw shortLabel Zfp36L1KO_Liver ES841 coverage longLabel Zfp36L1KO_Liver ES841 coverage type bigWig color 170,122,0 priority 2212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Zfp36L1KO Group2=Liver view=COV ## Coverage track track ES842_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES842_1.sickle.merged.topHat2pe_mm10.bw shortLabel Zfp36L1KO_Liver ES842 coverage longLabel Zfp36L1KO_Liver ES842 coverage type bigWig color 170,122,0 priority 2214 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Zfp36L1KO Group2=Liver view=COV ## Coverage track track ES843_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl ES843_1.sickle.merged.topHat2pe_mm10.bw shortLabel Zfp36L1KO_Liver ES843 coverage longLabel Zfp36L1KO_Liver ES843 coverage type bigWig color 170,122,0 priority 2216 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Zfp36L1KO Group2=Liver view=COV ## Coverage track track WT_Liver.union.TopHat2pe_mm10.bw_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl WT_Liver.union.TopHat2pe_mm10.bw shortLabel coverage longLabel coverage type bigWig color priority 2218 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NA Group2=NA view=COV ## Coverage track track Zfp36L1KO_Liver.union.TopHat2pe_mm10.bw_coverage parent NG138Zfp36L1KOLiverView1 on bigDataUrl Zfp36L1KO_Liver.union.TopHat2pe_mm10.bw shortLabel coverage longLabel coverage type bigWig color priority 2220 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NA Group2=NA view=COV ## Views track for RNAseq, junctions data track NG138Zfp36L1KOLiverView2 parent NG138Zfp36L1KOLiver shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on # combined junctions track track ES836_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES836_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel WT_Liver ES836 junctions longLabel WT_Liver ES836 junctions type bigBed 12 visibility pack priority 2222 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=Liver view=JUNC # combined junctions track track ES837_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES837_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel WT_Liver ES837 junctions longLabel WT_Liver ES837 junctions type bigBed 12 visibility pack priority 2224 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=Liver view=JUNC # combined junctions track track ES838_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES838_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel WT_Liver ES838 junctions longLabel WT_Liver ES838 junctions type bigBed 12 visibility pack priority 2226 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=Liver view=JUNC # combined junctions track track ES839_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES839_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel WT_Liver ES839 junctions longLabel WT_Liver ES839 junctions type bigBed 12 visibility pack priority 2228 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=Liver view=JUNC # combined junctions track track ES840_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES840_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel Zfp36L1KO_Liver ES840 junctions longLabel Zfp36L1KO_Liver ES840 junctions type bigBed 12 visibility pack priority 2230 scoreMin 10 scoreMax 100 color 170,122,0 subGroups Group1=Zfp36L1KO Group2=Liver view=JUNC # combined junctions track track ES841_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES841_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel Zfp36L1KO_Liver ES841 junctions longLabel Zfp36L1KO_Liver ES841 junctions type bigBed 12 visibility pack priority 2232 scoreMin 10 scoreMax 100 color 170,122,0 subGroups Group1=Zfp36L1KO Group2=Liver view=JUNC # combined junctions track track ES842_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES842_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel Zfp36L1KO_Liver ES842 junctions longLabel Zfp36L1KO_Liver ES842 junctions type bigBed 12 visibility pack priority 2234 scoreMin 10 scoreMax 100 color 170,122,0 subGroups Group1=Zfp36L1KO Group2=Liver view=JUNC # combined junctions track track ES843_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl ES843_1.sickle.merged.topHat2pe_mm10.sorted.bb shortLabel Zfp36L1KO_Liver ES843 junctions longLabel Zfp36L1KO_Liver ES843 junctions type bigBed 12 visibility pack priority 2236 scoreMin 10 scoreMax 100 color 170,122,0 subGroups Group1=Zfp36L1KO Group2=Liver view=JUNC # combined junctions track track WT_Liver_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl WT_Liver.TopHat2_mm10.combinedJunctions.bb shortLabel WT_Liver junctions longLabel WT_Liver junctions type bigBed 12 visibility pack priority 2238 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=WT Group2=Liver view=JUNC # combined junctions track track Zfp36L1KO_Liver_junctions parent NG138Zfp36L1KOLiverView2 on bigDataUrl Zfp36L1KO_Liver.TopHat2_mm10.combinedJunctions.bb shortLabel Zfp36L1KO_Liver junctions longLabel Zfp36L1KO_Liver junctions type bigBed 12 visibility pack priority 2240 scoreMin 10 scoreMax 100 color 170,122,0 subGroups Group1=Zfp36L1KO Group2=Liver view=JUNC