#!/usr/bin/perl

$ls = `ls -1 *.bed`;
foreach $bedfile (split/\n/, $ls) {
  $bigbed = $bedfile; $bigbed =~ s/\.bed/\.bigBed/;
  next if (-e $bigbed);
  print "/ddn/gs1/home/grimmsa/tools/ucsc/bedToBigBed $bedfile /ddn/gs1/shared/fargod/reference_genomes/mm10/mm10ordered.chromSizes $bigbed &\n";
}