track	KR_tKO_May2021
compositeTrack	on
shortLabel	tripleKO RNAseq, mouse gonad
longLabel	tripleKO RNAseq, mouse gonad; RNAseq Depth
priority	100
visibility	full
subGroup1	view View COVN=depthNorm
subGroup2	gt Genotype AIF-WWW-F=AIF-WWW-F AIF-WWW-M=AIF-WWW-M AIF-KKW-M=AIF-KKW-M AIF-KKK-M=AIF-KKK-M
subGroup3	replicate Replicate 0=0 1=1 2=2 3=3 4=4
subGroup4	str Strand plus=plus minus=minus
dimensions	dimX=gt dimY=replicate dimA=str
sortOrder	gt=+ replicate=+ str=-
configurable	on
type	bigWig

   track	KR_tKO_May2021ViewDepthN
   parent	KR_tKO_May2021
   shortLabel	NormDepth
   longLabel	Normalized RNA-seq Depth
   view	COVN
   visibility	full
   type	bigWig
   allButtonPair	on
   dragAndDrop	on
   alwaysZero	on
   graphTypeDefault	bar
   maxHeightPixels	150:40:11
   viewLimits	0:300
   showSubtrackColorOnUi	on
   viewUi	on

      track	AIF-WWW-F-rep1.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-F-rep1.depthNorm.plus.bw
      shortLabel	AIF-WWW-F-rep1 plus
      longLabel	normalized read depth: AIF-WWW-F-rep1 (plus strand)
      type	bigWig
      color	255,51,153
      priority	101
      visibility	hide
      subGroups	gt=AIF-WWW-F replicate=1 str=plus view=COVN

      track	AIF-WWW-F-rep1.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-F-rep1.depthNorm.minus.bw
      shortLabel	AIF-WWW-F-rep1 minus
      longLabel	normalized read depth: AIF-WWW-F-rep1 (minus strand)
      type	bigWig
      color	255,51,153
      priority	102
      visibility	hide
      subGroups	gt=AIF-WWW-F replicate=1 str=minus view=COVN

      track	AIF-WWW-F-rep4.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-F-rep4.depthNorm.plus.bw
      shortLabel	AIF-WWW-F-rep4 plus
      longLabel	normalized read depth: AIF-WWW-F-rep4 (plus strand)
      type	bigWig
      color	255,51,153
      priority	103
      visibility	hide
      subGroups	gt=AIF-WWW-F replicate=4 str=plus view=COVN

      track	AIF-WWW-F-rep4.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-F-rep4.depthNorm.minus.bw
      shortLabel	AIF-WWW-F-rep4 minus
      longLabel	normalized read depth: AIF-WWW-F-rep4 (minus strand)
      type	bigWig
      color	255,51,153
      priority	104
      visibility	hide
      subGroups	gt=AIF-WWW-F replicate=4 str=minus view=COVN

      track	AIF-WWW-M-rep0.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep0.depthNorm.plus.bw
      shortLabel	AIF-WWW-M-rep0 plus
      longLabel	normalized read depth: AIF-WWW-M-rep0 (plus strand)
      type	bigWig
      color	0,0,204
      priority	105
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=0 str=plus view=COVN

      track	AIF-WWW-M-rep0.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep0.depthNorm.minus.bw
      shortLabel	AIF-WWW-M-rep0 minus
      longLabel	normalized read depth: AIF-WWW-M-rep0 (minus strand)
      type	bigWig
      color	0,0,204
      priority	106
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=0 str=minus view=COVN

      track	AIF-WWW-M-rep1.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep1.depthNorm.plus.bw
      shortLabel	AIF-WWW-M-rep1 plus
      longLabel	normalized read depth: AIF-WWW-M-rep1 (plus strand)
      type	bigWig
      color	0,0,204
      priority	107
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=1 str=plus view=COVN

      track	AIF-WWW-M-rep1.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep1.depthNorm.minus.bw
      shortLabel	AIF-WWW-M-rep1 minus
      longLabel	normalized read depth: AIF-WWW-M-rep1 (minus strand)
      type	bigWig
      color	0,0,204
      priority	108
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=1 str=minus view=COVN

      track	AIF-WWW-M-rep2.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep2.depthNorm.plus.bw
      shortLabel	AIF-WWW-M-rep2 plus
      longLabel	normalized read depth: AIF-WWW-M-rep2 (plus strand)
      type	bigWig
      color	0,0,204
      priority	109
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=2 str=plus view=COVN

      track	AIF-WWW-M-rep2.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep2.depthNorm.minus.bw
      shortLabel	AIF-WWW-M-rep2 minus
      longLabel	normalized read depth: AIF-WWW-M-rep2 (minus strand)
      type	bigWig
      color	0,0,204
      priority	110
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=2 str=minus view=COVN

      track	AIF-WWW-M-rep3.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep3.depthNorm.plus.bw
      shortLabel	AIF-WWW-M-rep3 plus
      longLabel	normalized read depth: AIF-WWW-M-rep3 (plus strand)
      type	bigWig
      color	0,0,204
      priority	111
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=3 str=plus view=COVN

      track	AIF-WWW-M-rep3.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-WWW-M-rep3.depthNorm.minus.bw
      shortLabel	AIF-WWW-M-rep3 minus
      longLabel	normalized read depth: AIF-WWW-M-rep3 (minus strand)
      type	bigWig
      color	0,0,204
      priority	112
      visibility	hide
      subGroups	gt=AIF-WWW-M replicate=3 str=minus view=COVN

      track	AIF-KKW-M-rep1.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep1.depthNorm.plus.bw
      shortLabel	AIF-KKW-M-rep1 plus
      longLabel	normalized read depth: AIF-KKW-M-rep1 (plus strand)
      type	bigWig
      color	255,128,0
      priority	113
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=1 str=plus view=COVN

      track	AIF-KKW-M-rep1.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep1.depthNorm.minus.bw
      shortLabel	AIF-KKW-M-rep1 minus
      longLabel	normalized read depth: AIF-KKW-M-rep1 (minus strand)
      type	bigWig
      color	255,128,0
      priority	114
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=1 str=minus view=COVN

      track	AIF-KKW-M-rep2.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep2.depthNorm.plus.bw
      shortLabel	AIF-KKW-M-rep2 plus
      longLabel	normalized read depth: AIF-KKW-M-rep2 (plus strand)
      type	bigWig
      color	255,128,0
      priority	115
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=2 str=plus view=COVN

      track	AIF-KKW-M-rep2.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep2.depthNorm.minus.bw
      shortLabel	AIF-KKW-M-rep2 minus
      longLabel	normalized read depth: AIF-KKW-M-rep2 (minus strand)
      type	bigWig
      color	255,128,0
      priority	116
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=2 str=minus view=COVN

      track	AIF-KKW-M-rep3.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep3.depthNorm.plus.bw
      shortLabel	AIF-KKW-M-rep3 plus
      longLabel	normalized read depth: AIF-KKW-M-rep3 (plus strand)
      type	bigWig
      color	255,128,0
      priority	117
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=3 str=plus view=COVN

      track	AIF-KKW-M-rep3.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKW-M-rep3.depthNorm.minus.bw
      shortLabel	AIF-KKW-M-rep3 minus
      longLabel	normalized read depth: AIF-KKW-M-rep3 (minus strand)
      type	bigWig
      color	255,128,0
      priority	118
      visibility	hide
      subGroups	gt=AIF-KKW-M replicate=3 str=minus view=COVN

      track	AIF-KKK-M-rep2.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep2.depthNorm.plus.bw
      shortLabel	AIF-KKK-M-rep2 plus
      longLabel	normalized read depth: AIF-KKK-M-rep2 (plus strand)
      type	bigWig
      color	0,153,0
      priority	119
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=2 str=plus view=COVN

      track	AIF-KKK-M-rep2.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep2.depthNorm.minus.bw
      shortLabel	AIF-KKK-M-rep2 minus
      longLabel	normalized read depth: AIF-KKK-M-rep2 (minus strand)
      type	bigWig
      color	0,153,0
      priority	120
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=2 str=minus view=COVN

      track	AIF-KKK-M-rep3.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep3.depthNorm.plus.bw
      shortLabel	AIF-KKK-M-rep3 plus
      longLabel	normalized read depth: AIF-KKK-M-rep3 (plus strand)
      type	bigWig
      color	0,153,0
      priority	121
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=3 str=plus view=COVN

      track	AIF-KKK-M-rep3.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep3.depthNorm.minus.bw
      shortLabel	AIF-KKK-M-rep3 minus
      longLabel	normalized read depth: AIF-KKK-M-rep3 (minus strand)
      type	bigWig
      color	0,153,0
      priority	122
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=3 str=minus view=COVN

      track	AIF-KKK-M-rep4.plus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep4.depthNorm.plus.bw
      shortLabel	AIF-KKK-M-rep4 plus
      longLabel	normalized read depth: AIF-KKK-M-rep4 (plus strand)
      type	bigWig
      color	0,153,0
      priority	123
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=4 str=plus view=COVN

      track	AIF-KKK-M-rep4.minus.ND
      parent	KR_tKO_May2021ViewDepthN on
      bigDataUrl	DATA/RNA_tripleKO_May2021/AIF-KKK-M-rep4.depthNorm.minus.bw
      shortLabel	AIF-KKK-M-rep4 minus
      longLabel	normalized read depth: AIF-KKK-M-rep4 (minus strand)
      type	bigWig
      color	0,153,0
      priority	124
      visibility	hide
      subGroups	gt=AIF-KKK-M replicate=4 str=minus view=COVN