##================================================================== ## Beginning of track view of Dataset NOV0110 (mm10) ##------------------------------------------------------------------ ## mm10 NOV0110 Unstranded RNAseq track NOV0110 compositeTrack on shortLabel NOV0110 Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NOV0110 priority 4000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ Control=Control \ Bleomycin=Bleomycin \ SE2only=SE2only \ SE2plusBleomycin=SE2plusBleomycin subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0110View1 parent NOV0110 shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track ControlxRepS07_str1.s0_coverage parent NOV0110View1 on bigDataUrl ControlxRepS07_str1.bw shortLabel ControlxRepS07_str1.s0_coverage longLabel ControlxRepS07_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRepS08_str1.s0_coverage parent NOV0110View1 on bigDataUrl ControlxRepS08_str1.bw shortLabel ControlxRepS08_str1.s0_coverage longLabel ControlxRepS08_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRepS09_str1.s0_coverage parent NOV0110View1 on bigDataUrl ControlxRepS09_str1.bw shortLabel ControlxRepS09_str1.s0_coverage longLabel ControlxRepS09_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track BleomycinxRepS01_str1.s0_coverage parent NOV0110View1 on bigDataUrl BleomycinxRepS01_str1.bw shortLabel BleomycinxRepS01_str1.s0_coverage longLabel BleomycinxRepS01_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Bleomycin Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track BleomycinxRepS03_str1.s0_coverage parent NOV0110View1 on bigDataUrl BleomycinxRepS03_str1.bw shortLabel BleomycinxRepS03_str1.s0_coverage longLabel BleomycinxRepS03_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Bleomycin Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track BleomycinxRepS05_str1.s0_coverage parent NOV0110View1 on bigDataUrl BleomycinxRepS05_str1.bw shortLabel BleomycinxRepS05_str1.s0_coverage longLabel BleomycinxRepS05_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Bleomycin Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SE2onlyxRepS10_str1.s0_coverage parent NOV0110View1 on bigDataUrl SE2onlyxRepS10_str1.bw shortLabel SE2onlyxRepS10_str1.s0_coverage longLabel SE2onlyxRepS10_str1.s0_coverage unstranded bw type bigWig color 0,76,153 priority 4072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SE2only Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SE2onlyxRepS12_str1.s0_coverage parent NOV0110View1 on bigDataUrl SE2onlyxRepS12_str1.bw shortLabel SE2onlyxRepS12_str1.s0_coverage longLabel SE2onlyxRepS12_str1.s0_coverage unstranded bw type bigWig color 0,76,153 priority 4082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SE2only Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SE2plusBleomycinxRepS02_str1.s0_coverage parent NOV0110View1 on bigDataUrl SE2plusBleomycinxRepS02_str1.bw shortLabel SE2plusBleomycinxRepS02_str1.s0_coverage longLabel SE2plusBleomycinxRepS02_str1.s0_coverage unstranded bw type bigWig color 0,153,0 priority 4092 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SE2plusBleomycin Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SE2plusBleomycinxRepS04_str1.s0_coverage parent NOV0110View1 on bigDataUrl SE2plusBleomycinxRepS04_str1.bw shortLabel SE2plusBleomycinxRepS04_str1.s0_coverage longLabel SE2plusBleomycinxRepS04_str1.s0_coverage unstranded bw type bigWig color 0,153,0 priority 4102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SE2plusBleomycin Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SE2plusBleomycinxRepS06_str1.s0_coverage parent NOV0110View1 on bigDataUrl SE2plusBleomycinxRepS06_str1.bw shortLabel SE2plusBleomycinxRepS06_str1.s0_coverage longLabel SE2plusBleomycinxRepS06_str1.s0_coverage unstranded bw type bigWig color 0,153,0 priority 4112 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SE2plusBleomycin Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0110View2 parent NOV0110 shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track ControlxRepS07_junctions parent NOV0110View2 on bigDataUrl ControlxRepS07.bb shortLabel ControlxRepS07 junctions longLabel ControlxRepS07 junctions type bigBed 12 visibility pack priority 4122 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRepS08_junctions parent NOV0110View2 on bigDataUrl ControlxRepS08.bb shortLabel ControlxRepS08 junctions longLabel ControlxRepS08 junctions type bigBed 12 visibility pack priority 4132 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRepS09_junctions parent NOV0110View2 on bigDataUrl ControlxRepS09.bb shortLabel ControlxRepS09 junctions longLabel ControlxRepS09 junctions type bigBed 12 visibility pack priority 4142 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track BleomycinxRepS01_junctions parent NOV0110View2 on bigDataUrl BleomycinxRepS01.bb shortLabel BleomycinxRepS01 junctions longLabel BleomycinxRepS01 junctions type bigBed 12 visibility pack priority 4152 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Bleomycin Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track BleomycinxRepS03_junctions parent NOV0110View2 on bigDataUrl BleomycinxRepS03.bb shortLabel BleomycinxRepS03 junctions longLabel BleomycinxRepS03 junctions type bigBed 12 visibility pack priority 4162 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Bleomycin Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track BleomycinxRepS05_junctions parent NOV0110View2 on bigDataUrl BleomycinxRepS05.bb shortLabel BleomycinxRepS05 junctions longLabel BleomycinxRepS05 junctions type bigBed 12 visibility pack priority 4172 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Bleomycin Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SE2onlyxRepS10_junctions parent NOV0110View2 on bigDataUrl SE2onlyxRepS10.bb shortLabel SE2onlyxRepS10 junctions longLabel SE2onlyxRepS10 junctions type bigBed 12 visibility pack priority 4182 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SE2only Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SE2onlyxRepS12_junctions parent NOV0110View2 on bigDataUrl SE2onlyxRepS12.bb shortLabel SE2onlyxRepS12 junctions longLabel SE2onlyxRepS12 junctions type bigBed 12 visibility pack priority 4192 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SE2only Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SE2plusBleomycinxRepS02_junctions parent NOV0110View2 on bigDataUrl SE2plusBleomycinxRepS02.bb shortLabel SE2plusBleomycinxRepS02 junctions longLabel SE2plusBleomycinxRepS02 junctions type bigBed 12 visibility pack priority 4202 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SE2plusBleomycin Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SE2plusBleomycinxRepS04_junctions parent NOV0110View2 on bigDataUrl SE2plusBleomycinxRepS04.bb shortLabel SE2plusBleomycinxRepS04 junctions longLabel SE2plusBleomycinxRepS04 junctions type bigBed 12 visibility pack priority 4212 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SE2plusBleomycin Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SE2plusBleomycinxRepS06_junctions parent NOV0110View2 on bigDataUrl SE2plusBleomycinxRepS06.bb shortLabel SE2plusBleomycinxRepS06 junctions longLabel SE2plusBleomycinxRepS06 junctions type bigBed 12 visibility pack priority 4222 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SE2plusBleomycin Group2=NA Group3=Unstranded view=JUNC