##================================================================== ## Beginning of track view of Dataset NS50785 (mm10) ##------------------------------------------------------------------ ## mm10 NS50785 Unstranded RNAseq track NS50785pilot compositeTrack on shortLabel NS50785pilot Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NS50785pilot priority 4000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ Control=Control \ Treated=Treated subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NS50785pilotView1 parent NS50785pilot shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track ControlxRep01_str1.s0_coverage parent NS50785pilotView1 on bigDataUrl ControlxRep01_str1.bw shortLabel ControlxRep01_str1.s0_coverage longLabel ControlxRep01_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRep02_str1.s0_coverage parent NS50785pilotView1 on bigDataUrl ControlxRep02_str1.bw shortLabel ControlxRep02_str1.s0_coverage longLabel ControlxRep02_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRep03_str1.s0_coverage parent NS50785pilotView1 on bigDataUrl ControlxRep03_str1.bw shortLabel ControlxRep03_str1.s0_coverage longLabel ControlxRep03_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 4032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TreatedxRep09_str1.s0_coverage parent NS50785pilotView1 on bigDataUrl TreatedxRep09_str1.bw shortLabel TreatedxRep09_str1.s0_coverage longLabel TreatedxRep09_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Treated Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track TreatedxRep10_str1.s0_coverage parent NS50785pilotView1 on bigDataUrl TreatedxRep10_str1.bw shortLabel TreatedxRep10_str1.s0_coverage longLabel TreatedxRep10_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 4052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Treated Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NS50785pilotView2 parent NS50785pilot shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track ControlxRep01_junctions parent NS50785pilotView2 on bigDataUrl ControlxRep01.bb shortLabel ControlxRep01 junctions longLabel ControlxRep01 junctions type bigBed 12 visibility pack priority 4062 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRep02_junctions parent NS50785pilotView2 on bigDataUrl ControlxRep02.bb shortLabel ControlxRep02 junctions longLabel ControlxRep02 junctions type bigBed 12 visibility pack priority 4072 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRep03_junctions parent NS50785pilotView2 on bigDataUrl ControlxRep03.bb shortLabel ControlxRep03 junctions longLabel ControlxRep03 junctions type bigBed 12 visibility pack priority 4082 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TreatedxRep09_junctions parent NS50785pilotView2 on bigDataUrl TreatedxRep09.bb shortLabel TreatedxRep09 junctions longLabel TreatedxRep09 junctions type bigBed 12 visibility pack priority 4092 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Treated Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track TreatedxRep10_junctions parent NS50785pilotView2 on bigDataUrl TreatedxRep10.bb shortLabel TreatedxRep10 junctions longLabel TreatedxRep10 junctions type bigBed 12 visibility pack priority 4102 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Treated Group2=NA Group3=Unstranded view=JUNC