##================================================================== ## Beginning of track view of Dataset DF18010 (mm10) ##------------------------------------------------------------------ ## mm10 DF18010 Unstranded RNAseq track DF18010Foxl2 compositeTrack on shortLabel DF18010Foxl2 Unstranded RNAseq longLabel mm10 Unstranded RNAseq project DF18010Foxl2 priority 2000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ PC=PC \ PF=PF subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track DF18010Foxl2View1 parent DF18010Foxl2 shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track PCxRep1_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PCxRep1_str1.bw shortLabel PCxRep1_str1.s0_coverage longLabel PCxRep1_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PC Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PCxRep2_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PCxRep2_str1.bw shortLabel PCxRep2_str1.s0_coverage longLabel PCxRep2_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PC Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PCxRep3_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PCxRep3_str1.bw shortLabel PCxRep3_str1.s0_coverage longLabel PCxRep3_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PC Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PCxRep4_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PCxRep4_str1.bw shortLabel PCxRep4_str1.s0_coverage longLabel PCxRep4_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PC Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PFxRep1_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PFxRep1_str1.bw shortLabel PFxRep1_str1.s0_coverage longLabel PFxRep1_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PF Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PFxRep2_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PFxRep2_str1.bw shortLabel PFxRep2_str1.s0_coverage longLabel PFxRep2_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PF Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PFxRep3_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PFxRep3_str1.bw shortLabel PFxRep3_str1.s0_coverage longLabel PFxRep3_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PF Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track PFxRep4_str1.s0_coverage parent DF18010Foxl2View1 on bigDataUrl PFxRep4_str1.bw shortLabel PFxRep4_str1.s0_coverage longLabel PFxRep4_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=PF Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track DF18010Foxl2View2 parent DF18010Foxl2 shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track PCxRep1_junctions parent DF18010Foxl2View2 on bigDataUrl PCxRep1.bb shortLabel PCxRep1 junctions longLabel PCxRep1 junctions type bigBed 12 visibility pack priority 2092 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PC Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PCxRep2_junctions parent DF18010Foxl2View2 on bigDataUrl PCxRep2.bb shortLabel PCxRep2 junctions longLabel PCxRep2 junctions type bigBed 12 visibility pack priority 2102 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PC Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PCxRep3_junctions parent DF18010Foxl2View2 on bigDataUrl PCxRep3.bb shortLabel PCxRep3 junctions longLabel PCxRep3 junctions type bigBed 12 visibility pack priority 2112 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PC Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PCxRep4_junctions parent DF18010Foxl2View2 on bigDataUrl PCxRep4.bb shortLabel PCxRep4 junctions longLabel PCxRep4 junctions type bigBed 12 visibility pack priority 2122 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PC Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PFxRep1_junctions parent DF18010Foxl2View2 on bigDataUrl PFxRep1.bb shortLabel PFxRep1 junctions longLabel PFxRep1 junctions type bigBed 12 visibility pack priority 2132 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PF Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PFxRep2_junctions parent DF18010Foxl2View2 on bigDataUrl PFxRep2.bb shortLabel PFxRep2 junctions longLabel PFxRep2 junctions type bigBed 12 visibility pack priority 2142 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PF Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PFxRep3_junctions parent DF18010Foxl2View2 on bigDataUrl PFxRep3.bb shortLabel PFxRep3 junctions longLabel PFxRep3 junctions type bigBed 12 visibility pack priority 2152 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PF Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track PFxRep4_junctions parent DF18010Foxl2View2 on bigDataUrl PFxRep4.bb shortLabel PFxRep4 junctions longLabel PFxRep4 junctions type bigBed 12 visibility pack priority 2162 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=PF Group2=NA Group3=Unstranded view=JUNC