##================================================================== ## Beginning of track view of Dataset NOV0047 (hg19) ##------------------------------------------------------------------ ## hg19 NOV0047 Unstranded RNAseq track NOV0047sck compositeTrack on shortLabel NOV0047sck Unstranded RNAseq longLabel hg19 Unstranded RNAseq project NOV0047sck priority 2000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ grpA=grpA \ grpB=grpB subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0047sckView1 parent NOV0047sck shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track SCKgrpAxRep33_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpAxRep33_str1.bw shortLabel SCKgrpAxRep33_str1.s0_coverage longLabel SCKgrpAxRep33_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpA Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SCKgrpAxRep39_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpAxRep39_str1.bw shortLabel SCKgrpAxRep39_str1.s0_coverage longLabel SCKgrpAxRep39_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpA Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SCKgrpAxRep40_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpAxRep40_str1.bw shortLabel SCKgrpAxRep40_str1.s0_coverage longLabel SCKgrpAxRep40_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpA Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SCKgrpBxRep37_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpBxRep37_str1.bw shortLabel SCKgrpBxRep37_str1.s0_coverage longLabel SCKgrpBxRep37_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpB Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SCKgrpBxRep42_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpBxRep42_str1.bw shortLabel SCKgrpBxRep42_str1.s0_coverage longLabel SCKgrpBxRep42_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpB Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SCKgrpBxRep43_str1.s0_coverage parent NOV0047sckView1 on bigDataUrl SCKgrpBxRep43_str1.bw shortLabel SCKgrpBxRep43_str1.s0_coverage longLabel SCKgrpBxRep43_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=grpB Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0047sckView2 parent NOV0047sck shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track SCKgrpAxRep33_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpAxRep33.bb shortLabel SCKgrpAxRep33 junctions longLabel SCKgrpAxRep33 junctions type bigBed 12 visibility pack priority 2072 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpA Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SCKgrpAxRep39_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpAxRep39.bb shortLabel SCKgrpAxRep39 junctions longLabel SCKgrpAxRep39 junctions type bigBed 12 visibility pack priority 2082 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpA Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SCKgrpAxRep40_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpAxRep40.bb shortLabel SCKgrpAxRep40 junctions longLabel SCKgrpAxRep40 junctions type bigBed 12 visibility pack priority 2092 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpA Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SCKgrpBxRep37_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpBxRep37.bb shortLabel SCKgrpBxRep37 junctions longLabel SCKgrpBxRep37 junctions type bigBed 12 visibility pack priority 2102 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpB Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SCKgrpBxRep42_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpBxRep42.bb shortLabel SCKgrpBxRep42 junctions longLabel SCKgrpBxRep42 junctions type bigBed 12 visibility pack priority 2112 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpB Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SCKgrpBxRep43_junctions parent NOV0047sckView2 on bigDataUrl SCKgrpBxRep43.bb shortLabel SCKgrpBxRep43 junctions longLabel SCKgrpBxRep43 junctions type bigBed 12 visibility pack priority 2122 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=grpB Group2=NA Group3=Unstranded view=JUNC