##-------- ## Coverage track track G1_1013acxBR1_coverage bigDataUrl G1_1013acxBR1.bw shortLabel G1_1013acxBR1_coverage longLabel G1_1013acxBR1_coverage unstranded bw type bigWig color 231,76,60 priority 1012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G1_1013CTCFxBR1_coverage bigDataUrl G1_1013CTCFxBR1.bw shortLabel G1_1013CTCFxBR1_coverage longLabel G1_1013CTCFxBR1_coverage unstranded bw type bigWig color 125,102,8 priority 1022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G1_1013me1xBR1_coverage bigDataUrl G1_1013me1xBR1.bw shortLabel G1_1013me1xBR1_coverage longLabel G1_1013me1xBR1_coverage unstranded bw type bigWig color 11,83,69 priority 1032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G1_InputxBR1_coverage bigDataUrl G1_InputxBR1.bw shortLabel G1_InputxBR1_coverage longLabel G1_InputxBR1_coverage unstranded bw type bigWig color 128,128,128 priority 1102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G2_1011CTCFxBR1_coverage bigDataUrl G2_1011CTCFxBR1.bw shortLabel G2_1011CTCFxBR1_coverage longLabel G2_1011CTCFxBR1_coverage unstranded bw type bigWig color 231,76,60 priority 2112 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G2_1013CTCFxBR1_coverage bigDataUrl G2_1013CTCFxBR1.bw shortLabel G2_1013CTCFxBR1_coverage longLabel G2_1013CTCFxBR1_coverage unstranded bw type bigWig color 125,102,8 priority 2122 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G2_1015CTCFxBR1_coverage bigDataUrl G2_1015CTCFxBR1.bw shortLabel G2_1015CTCFxBR1_coverage longLabel G2_1015CTCFxBR1_coverage unstranded bw type bigWig color 11,83,69 priority 2132 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G2_InputxBR1_coverage bigDataUrl G2_InputxBR1.bw shortLabel G2_InputxBR1_coverage longLabel G2_InputxBR1_coverage unstranded bw type bigWig color 128,128,128 priority 2202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G3_1011me1xBR1_coverage bigDataUrl G3_1011me1xBR1.bw shortLabel G3_1011me1xBR1_coverage longLabel G3_1011me1xBR1_coverage unstranded bw type bigWig color 231,76,60 priority 3212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G3_1013me1xBR1_coverage bigDataUrl G3_1013me1xBR1.bw shortLabel G3_1013me1xBR1_coverage longLabel G3_1013me1xBR1_coverage unstranded bw type bigWig color 125,102,8 priority 3222 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G3_1015me1xBR1_coverage bigDataUrl G3_1015me1xBR1.bw shortLabel G3_1015me1xBR1_coverage longLabel G3_1015me1xBR1_coverage unstranded bw type bigWig color 11,83,69 priority 3232 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G3_InputxBR1_coverage bigDataUrl G3_InputxBR1.bw shortLabel G3_InputxBR1_coverage longLabel G3_InputxBR1_coverage unstranded bw type bigWig color 128,128,128 priority 3302 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G4_1013acxBR1_coverage bigDataUrl G4_1013acxBR1.bw shortLabel G4_1013acxBR1_coverage longLabel G4_1013acxBR1_coverage unstranded bw type bigWig color 231,76,60 priority 4312 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G4_InputxBR1_coverage bigDataUrl G4_InputxBR1.bw shortLabel G4_InputxBR1_coverage longLabel G4_InputxBR1_coverage unstranded bw type bigWig color 128,128,128 priority 4402 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G4_swHS1011acxBR1_coverage bigDataUrl G4_swHS1011acxBR1.bw shortLabel G4_swHS1011acxBR1_coverage longLabel G4_swHS1011acxBR1_coverage unstranded bw type bigWig color 125,102,8 priority 4322 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track G4_swHS1015acxBR1_coverage bigDataUrl G4_swHS1015acxBR1.bw shortLabel G4_swHS1015acxBR1_coverage longLabel G4_swHS1015acxBR1_coverage unstranded bw type bigWig color 11,83,69 priority 4332 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## SNP track track SNP_gage bigDataUrl gage_SNPs.bb shortLabel DF18012_SNPgage longLabel DF18012_SNPgage bb type bigBed color 255,0,0 priority 5000 graphTypeDefault bar visibility full ##-------- ## SNP track track SNP_pre bigDataUrl pre_SNPs.bb shortLabel DF18012_SNPpre longLabel DF18012_SNPpre bb type bigBed color 255,0,0 priority 5002 graphTypeDefault bar visibility full track Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1001 bigDataUrl https://orio.niehs.nih.gov/ucscview/DeMayo/ATACseq-human-NS50792/swHS1001-93M.bw shortLabel swHS1001 longLabel Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1001 (unique mapped normalized to 93M reads) type bigWig visibility full viewLimits 0:50 color 128,0,0 track Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1013 bigDataUrl https://orio.niehs.nih.gov/ucscview/DeMayo/ATACseq-human-NS50792/swHS1013-93M.bw shortLabel swHS1013 longLabel Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1013 (unique mapped normalized to 93M reads) type bigWig visibility full viewLimits 0:50 color 128,0,0 track Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1015 bigDataUrl https://orio.niehs.nih.gov/ucscview/DeMayo/ATACseq-human-NS50792/swHS1015-93M.bw shortLabel swHS1015 longLabel Human-uterine-smooth-muscle-ATACseq-NS50792-swHS1015 (unique mapped normalized to 93M reads) type bigWig visibility full viewLimits 0:50 color 128,0,0 ##-------- # ## Coverage track # track HgMyo-IN_coverage # bigDataUrl HgMyo-IN.bw # shortLabel HgMyo-IN_coverage # longLabel HgMyo-IN_coverage unstranded bw # type bigWig # color 102,51,0 # priority 9002 # alwaysZero on # graphTypeDefault bar # maxHeightPixels 100:60:8 # smoothingWindow 2 # transformFunc NONE # windowingFunction mean+whiskers # gridDefault on # viewLimits 0:50 # visibility full ##-------- ## Coverage track track S1-A_coverage bigDataUrl S1-A_hg38.bw shortLabel S1-A_coverage longLabel S1-A_coverage unstranded bw type bigWig color 102,0,204 priority 9022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track S1-B_coverage bigDataUrl S1-B_hg38.bw shortLabel S1-B_coverage longLabel S1-B_coverage unstranded bw type bigWig color 102,0,204 priority 9042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track S2-A_coverage bigDataUrl S2-A_hg38.bw shortLabel S2-A_coverage longLabel S2-A_coverage unstranded bw type bigWig color 0,51,102 priority 9062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track S2-B_coverage bigDataUrl S2-B_hg38.bw shortLabel S2-B_coverage longLabel S2-B_coverage unstranded bw type bigWig color 0,51,102 priority 9082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track S3-A_coverage bigDataUrl S3-A_hg38.bw shortLabel S3-A_coverage longLabel S3-A_coverage unstranded bw type bigWig color 0,51,0 priority 9102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##-------- ## Coverage track track S3-B_coverage bigDataUrl S3-B_hg38.bw shortLabel S3-B_coverage longLabel S3-B_coverage unstranded bw type bigWig color 0,51,0 priority 9122 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:50 visibility full ##================================================================== ## Beginning of track view of Dataset NS50829.NS50836 (hg38) ##------------------------------------------------------------------ ## hg38 NS50829.NS50836 Unstranded RNAseq track NS50829.NS50836sw compositeTrack on shortLabel NS50829.NS50836sw Unstranded RNAseq longLabel hg38 Unstranded RNAseq project NS50829.NS50836sw priority 10000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ SW=SW subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NS50829.NS50836swView1 parent NS50829.NS50836sw shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track SWxRepsw37_normalized.s0_coverage parent NS50829.NS50836swView1 on bigDataUrl SWxRepsw37_normalized.bw shortLabel SWxRepsw37_normalized.s0_coverage longLabel SWxRepsw37_normalized.s0_coverage unstranded bw type bigWig color 76,0,153 priority 10012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SW Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SWxRepsw43_normalized.s0_coverage parent NS50829.NS50836swView1 on bigDataUrl SWxRepsw43_normalized.bw shortLabel SWxRepsw43_normalized.s0_coverage longLabel SWxRepsw43_normalized.s0_coverage unstranded bw type bigWig color 76,0,153 priority 10022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SW Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SWxRepswHS1011_normalized.s0_coverage parent NS50829.NS50836swView1 on bigDataUrl SWxRepswHS1011_normalized.bw shortLabel SWxRepswHS1011_normalized.s0_coverage longLabel SWxRepswHS1011_normalized.s0_coverage unstranded bw type bigWig color 76,0,153 priority 10032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SW Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SWxRepswHS1013_normalized.s0_coverage parent NS50829.NS50836swView1 on bigDataUrl SWxRepswHS1013_normalized.bw shortLabel SWxRepswHS1013_normalized.s0_coverage longLabel SWxRepswHS1013_normalized.s0_coverage unstranded bw type bigWig color 76,0,153 priority 10042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SW Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track SWxRepswHS1015_normalized.s0_coverage parent NS50829.NS50836swView1 on bigDataUrl SWxRepswHS1015_normalized.bw shortLabel SWxRepswHS1015_normalized.s0_coverage longLabel SWxRepswHS1015_normalized.s0_coverage unstranded bw type bigWig color 76,0,153 priority 10052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=SW Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NS50829.NS50836swView2 parent NS50829.NS50836sw shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track SWxRepsw37_junctions parent NS50829.NS50836swView2 on bigDataUrl SWxRepsw37.bb shortLabel SWxRepsw37 junctions longLabel SWxRepsw37 junctions type bigBed 12 visibility pack priority 10062 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SW Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SWxRepsw43_junctions parent NS50829.NS50836swView2 on bigDataUrl SWxRepsw43.bb shortLabel SWxRepsw43 junctions longLabel SWxRepsw43 junctions type bigBed 12 visibility pack priority 10072 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SW Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SWxRepswHS1011_junctions parent NS50829.NS50836swView2 on bigDataUrl SWxRepswHS1011.bb shortLabel SWxRepswHS1011 junctions longLabel SWxRepswHS1011 junctions type bigBed 12 visibility pack priority 10082 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SW Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SWxRepswHS1013_junctions parent NS50829.NS50836swView2 on bigDataUrl SWxRepswHS1013.bb shortLabel SWxRepswHS1013 junctions longLabel SWxRepswHS1013 junctions type bigBed 12 visibility pack priority 10092 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SW Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track SWxRepswHS1015_junctions parent NS50829.NS50836swView2 on bigDataUrl SWxRepswHS1015.bb shortLabel SWxRepswHS1015 junctions longLabel SWxRepswHS1015 junctions type bigBed 12 visibility pack priority 10102 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=SW Group2=NA Group3=Unstranded view=JUNC