##================================================================== ## Beginning of track view of Dataset NOV0061 (mm10) ##------------------------------------------------------------------ ## mm10 NOV0061 Unstranded RNAseq track NOV0061mu compositeTrack on shortLabel NOV0061mu Unstranded RNAseq longLabel mm10 Unstranded RNAseq project NOV0061mu priority 2000 visibility full configurable on type bed 3 subGroup1 view Views \ COV=Coverage \ JUNC=Junctions subGroup2 Group1 Group1 \ Control=Control \ Mutant=Mutant subGroup3 Group2 Group2 \ NA=NA subGroup4 Group3 Group3 \ NA=NA dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ Group3=- view=+ ## ==================== ## Views track coverage data track NOV0061muView1 parent NOV0061mu shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewUi on ##-------- ## Coverage track track ControlxRsw81_str1.s0_coverage parent NOV0061muView1 on bigDataUrl ControlxRsw81_str1.bw shortLabel ControlxRsw81_str1.s0_coverage longLabel ControlxRsw81_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2012 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRsw82_str1.s0_coverage parent NOV0061muView1 on bigDataUrl ControlxRsw82_str1.bw shortLabel ControlxRsw82_str1.s0_coverage longLabel ControlxRsw82_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2022 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRsw83_str1.s0_coverage parent NOV0061muView1 on bigDataUrl ControlxRsw83_str1.bw shortLabel ControlxRsw83_str1.s0_coverage longLabel ControlxRsw83_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2032 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track ControlxRsw84_str1.s0_coverage parent NOV0061muView1 on bigDataUrl ControlxRsw84_str1.bw shortLabel ControlxRsw84_str1.s0_coverage longLabel ControlxRsw84_str1.s0_coverage unstranded bw type bigWig color 76,0,153 priority 2042 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Control Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track MutantxRsw87_str1.s0_coverage parent NOV0061muView1 on bigDataUrl MutantxRsw87_str1.bw shortLabel MutantxRsw87_str1.s0_coverage longLabel MutantxRsw87_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2052 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Mutant Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track MutantxRsw88_str1.s0_coverage parent NOV0061muView1 on bigDataUrl MutantxRsw88_str1.bw shortLabel MutantxRsw88_str1.s0_coverage longLabel MutantxRsw88_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2062 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Mutant Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track MutantxRsw89_str1.s0_coverage parent NOV0061muView1 on bigDataUrl MutantxRsw89_str1.bw shortLabel MutantxRsw89_str1.s0_coverage longLabel MutantxRsw89_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2072 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Mutant Group2=NA Group3=s1Pos view=COV ##-------- ## Coverage track track MutantxRsw90_str1.s0_coverage parent NOV0061muView1 on bigDataUrl MutantxRsw90_str1.bw shortLabel MutantxRsw90_str1.s0_coverage longLabel MutantxRsw90_str1.s0_coverage unstranded bw type bigWig color 153,0,76 priority 2082 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:1000 visibility hide subGroups Group1=Mutant Group2=NA Group3=s1Pos view=COV ## ==================== ## Views track for RNAseq, junctions data track NOV0061muView2 parent NOV0061mu shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on ##-------- # combined junctions track track ControlxRsw81_junctions parent NOV0061muView2 on bigDataUrl ControlxRsw81.bb shortLabel ControlxRsw81 junctions longLabel ControlxRsw81 junctions type bigBed 12 visibility pack priority 2092 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRsw82_junctions parent NOV0061muView2 on bigDataUrl ControlxRsw82.bb shortLabel ControlxRsw82 junctions longLabel ControlxRsw82 junctions type bigBed 12 visibility pack priority 2102 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRsw83_junctions parent NOV0061muView2 on bigDataUrl ControlxRsw83.bb shortLabel ControlxRsw83 junctions longLabel ControlxRsw83 junctions type bigBed 12 visibility pack priority 2112 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track ControlxRsw84_junctions parent NOV0061muView2 on bigDataUrl ControlxRsw84.bb shortLabel ControlxRsw84 junctions longLabel ControlxRsw84 junctions type bigBed 12 visibility pack priority 2122 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Control Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track MutantxRsw87_junctions parent NOV0061muView2 on bigDataUrl MutantxRsw87.bb shortLabel MutantxRsw87 junctions longLabel MutantxRsw87 junctions type bigBed 12 visibility pack priority 2132 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Mutant Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track MutantxRsw88_junctions parent NOV0061muView2 on bigDataUrl MutantxRsw88.bb shortLabel MutantxRsw88 junctions longLabel MutantxRsw88 junctions type bigBed 12 visibility pack priority 2142 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Mutant Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track MutantxRsw89_junctions parent NOV0061muView2 on bigDataUrl MutantxRsw89.bb shortLabel MutantxRsw89 junctions longLabel MutantxRsw89 junctions type bigBed 12 visibility pack priority 2152 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Mutant Group2=NA Group3=Unstranded view=JUNC ##-------- # combined junctions track track MutantxRsw90_junctions parent NOV0061muView2 on bigDataUrl MutantxRsw90.bb shortLabel MutantxRsw90 junctions longLabel MutantxRsw90 junctions type bigBed 12 visibility pack priority 2162 scoreMin 10 scoreMax 100 color 147,37,37 subGroups Group1=Mutant Group2=NA Group3=Unstranded view=JUNC